Job Description P09053 Confidence 99.85% Date Thu Jan 5 11:01:50 GMT 2012 Rank 212 Aligned Residues 322 % Identity 13% Template d2v1pa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 1.9

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	.	.	.	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E
Query Conservation																																																														.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		F	S	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	.	.	.	.	.	.	.	.	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P	V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I
Template Known Secondary structure		S	S	S															T	.	.	.	.	.	.	.	.			S							S	S	T	T	T																				T	T	T						S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.									.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.															.	.	.	.															.
Query SS confidence																				.	.	.	.	.															.	.	.	.															.
Query Sequence		E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	.	.	.	.	.	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	.	.	.	.	E	T	G	M	I	C	V	S	R	P	T	N	P	T	.	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V
Query Conservation																				.	.	.	.	.															.	.	.	.															.
Alig confidence																				.	.	.	.	.															.	.	.	.															.
Template Conservation
Template Sequence		N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I	V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V
Template Known Secondary structure		T	T							B		T	T	T	T		T	T	S			T	T	T	T		B														G	G	G								S	S	B		G	G	G		B																	T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		217	.	.	220	.													.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.
Query Sequence		I	D	N	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	.	.	.	.	.
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.	.	.	.
Template Conservation
Template Sequence		M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D	A	M	V	P	M	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	V	V	Q	E	G	F	P	T
Template Known Secondary structure					T	T													G	G	G	T	T	S										G	G	G		S						S	S	S	T	T			S	S								S	G	G	G													T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.								.	.	.	.	.	350
Predicted Secondary structure		.	.																																																																		.	.	.	.	.	.	.
Query SS confidence		.	.																																																																		.	.	.	.	.	.	.
Query Sequence		.	.	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	.	.	.	.	.	.	.	F	K	D	L	P	I
Query Conservation		.	.																																																																		.	.	.	.	.	.	.
Alig confidence		.	.																.	.	.	.	.	.	.	.	.																												.	.													.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.																												.	.
Template Sequence		Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	.	.	.	.	.	.	.	.	.	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G	V	.	.	V	Q	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	Q	F
Template Known Secondary structure																			.	.	.	.	.	.	.	.	.		T	T																						T	T		.	.						S	S										S	T	T	S		G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.																												.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.										.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		351	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.					.	.	.	.	.	390	.	.	.				.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure											.																										.	.	.	.										.	.	.
Query SS confidence											.																										.	.	.	.										.	.	.
Query Sequence		T	T	K	Q	L	Y	Q	R	L	.	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	.	.	.	.	Q	C	M	R	M	N	Y	V	P	.	.	.	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E
Query Conservation											.																										.	.	.	.										.	.	.
Alig confidence											.																										.	.	.	.										.	.	.
Template Conservation
Template Sequence		P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E
Template Known Secondary structure																						S						B		T	T	T		S	B				S										T	T	T
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions