Job Description P09053 Confidence 100.00% Date Thu Jan 5 11:01:50 GMT 2012 Rank 78 Aligned Residues 324 % Identity 17% Template d2f8ja1 SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.40

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		20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		M	E	D	L	N	D	G	.	.	.	.	.	L	R	T	P	G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																					.	.														.	.	.	.	.																										.	.	.
Template Conservation																																		.	.														.	.	.	.	.																										.	.	.
Template Sequence		L	D	L	I	A	K	R	A	Y	P	Y	E	T	E	K	R	D	K	T	Y	L	A	L	N	E	N	P	F	P	F	P	E	.	.	D	L	V	D	E	V	F	R	R	L	N	S	D	.	.	.	.	.	A	L	R	I	Y	Y	D	S	P	D	E	E	L	I	E	K	I	L	S	Y	L	D	T	D	F	.	.	.
Template Known Secondary structure									S										S				S	S				S	S					.	.												T	T	.	.	.	.	.	G	G	G	S				S	S													T		S	S	.	.	.
Template Predicted Secondary structure																																		.	.														.	.	.	.	.																										.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	K	N	N	V	S	V	G	N	G	A	D	E	I	I	Y	V	M	M	L	M	.	.	.	.	.	.	.	.	.	.	F	D	R	S	V	F	F	P	P	T	Y	S	C	Y	R	I	F	A	K	A	V	G	A	K	F	L	E	V	P	L	T	K	D	L	R	I	P	E	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				G	G	G																		.	.	.	.	.	.	.	.	.	.	S	S						S	S													T										T	T	S					.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.											.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	.	L	G	L	P
Query Conservation																																																																													.
Alig confidence																														.	.	.	.																						.	.																					.
Template Conservation																														.	.	.	.																						.	.
Template Sequence		V	N	V	G	E	G	D	V	V	F	I	P	N	P	N	N	P	T	G	H	V	F	E	R	E	E	I	E	.	.	.	.	R	I	L	K	T	G	A	F	V	A	L	D	E	A	Y	Y	E	F	H	G	E	.	.	S	Y	V	D	F	L	K	K	Y	E	N	L	A	V	I	R	T	F	S	K	A	F	S	L	A
Template Known Secondary structure						T	T							S	S		T	T	T											.	.	.	.				T	T	T								T	T	G	G	G	T			.	.			G	G	G	G	G	T		S	S							S	T	T	T	S	S		T
Template Predicted Secondary structure																														.	.	.	.																						.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H
Query Conservation
Alig confidence																								.	.																		.	.	.	.																											.	.	.	.
Template Conservation																								.	.																		.	.	.	.																											.	.	.	.
Template Sequence		A	Q	R	V	G	Y	V	V	A	S	E	K	F	I	D	A	Y	N	R	V	R	L	.	.	P	F	N	V	S	Y	V	S	Q	M	F	A	K	V	A	L	D	.	.	.	.	H	R	E	I	F	E	E	R	T	K	F	I	V	E	E	R	E	R	M	K	S	A	L	R	E	M	.	.	.	.	G	Y	R	I	T
Template Known Secondary structure		T	T																			S		.	.	T	T		S														.	.	.	.	T																										.	.	.	.	T
Template Predicted Secondary structure																								.	.																		.	.	.	.																											.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E
Query Conservation
Alig confidence							.									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation							.									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		D	S	R	G	N	.	F	V	F	V	F	M	E	K	.	.	E	E	K	E	R	L	L	E	H	L	R	T	K	N	V	A	V	R	S	F	R	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	I	T	I	G	.	K	R	E	E	N	D	M	I	L	R	E	L	E	V
Template Known Secondary structure					S	S	.									.	.													T	T							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Predicted Secondary structure							.									.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		278	.	280	.	.		.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.															.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions