Job Description P09053 Confidence 99.93% Date Thu Jan 5 11:01:50 GMT 2012 Rank 167 Aligned Residues 324 % Identity 13% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																				.	.	.	.	.																												.	.
Query SS confidence																																				.	.	.	.	.																												.	.
Query Sequence		N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	.	.	.	.	.	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	.	.	I	A	L	T	N	G	S	Q	S	A	F	F
Query Conservation																																				.	.	.	.	.																												.	.
Alig confidence																																				.	.	.	.	.																.	.	.	.	.	.							.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		N	A	G	P	A	A	L	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	.	.	.	.	.	.	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A	S	T	Q	F	A
Template Known Secondary structure			S	S	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																		T	.	.	.	.	.	.	T			S	S							S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.																																					.
Query SS confidence																														.	.																																					.
Query Sequence		Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	.	.	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	.	I	G	E	E	T	G	M	I	C	V	S	R	P
Query Conservation																														.	.																																					.
Alig confidence																				.	.	.	.	.	.					.	.																		.	.	.	.	.															.
Template Conservation																				.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		M	I	P	M	N	F	L	K	E	G	Q	T	A	N	Y	V	M	T	.	.	.	.	.	.	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	.	.	.	.	.	E	A	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	L	Q	D	N	A	A	Y	L	H	L	T	S	N
Template Known Secondary structure										T	T									.	.	.	.	.	.	S														S									.	.	.	.	.	G	G	G	T	T		S				G	G	G					T	T								S
Template Predicted Secondary structure																				.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.															.
Template Conservation											.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.															.
Template Sequence		E	T	I	E	G	A	Q	F	K	.	.	.	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	I	L	S	R	P	F	D	L	N	Q	F	G	.	.	.	.	.	.	.	L	V	Y	A	G	A	Q	K	N	L	G	P	S	G	.	V	T	V	V	I	V	R	E	D	L	V	A
Template Known Secondary structure			T	T	T	T				S	.	.	.	.	.	.	.	.	S					T	T	S							T	T	T	T	T	S	S				G	G	G		S	.	.	.	.	.	.	.						T	T	T	T	T			S	S	.								G	G	G	S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.															.
Template SS confidence
		152	.	.	.	.	.	.	.	160									.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.								190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.
		269	270	.													.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	T	.	.	.	.	.	.	.	.	.	.	.	.	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																											.																											.	.	.
Template Conservation																																											.																											.	.	.
Template Sequence		E	S	P	K	H	L	P	T	M	L	R	Y	D	T	Y	V	K	N	N	S	L	Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	.	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	.	.	.	G	G	F	Y	R	G	C	V	D
Template Known Secondary structure		S			T	T	S		G	G	G								T	T	T		S	S																			.		T	T																						T	S	.	.	.	T	T	S	S			S	S
Template Predicted Secondary structure																																											.																											.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.
		337					.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure			.	.	.	.																																																							.	.
Query SS confidence			.	.	.	.																																																							.	.
Query Sequence		G	.	.	.	.	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	.	.	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E
Query Conservation			.	.	.	.																																																							.	.
Alig confidence			.	.	.	.											.																							.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	S	R	S	D	M	N	I	T	F	R	L	A	S	.	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	.	.	.	.	.	.	.	.	.	.	.	R	S	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H	F	K	R
Template Known Secondary structure		G	G	G	B		S	S							S		.														T	T			S		B			.	.	.	.	.	.	.	.	.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure																	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.												.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		411
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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