Job Description P09053 Confidence 99.79% Date Thu Jan 5 11:01:50 GMT 2012 Rank 225 Aligned Residues 292 % Identity 12% Template d2a7va1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.04

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	.	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V
Query Conservation																														.
Alig confidence																														.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	G	V	D	E	I	E	L	L	C	Q	R	R	A	L	E	A	F	D	L	D	P	A	Q	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	L	A	V	Y	T	A	L	L	Q	P	H	D	R	I	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T														T	T			T	T	T								S	S															S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.			.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.
Query SS confidence																																																																								.	.
Query Sequence		S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	.	.	G	V	P	F	P	G	I	I
Query Conservation																																																																								.	.
Alig confidence		.	.	.	.	.	.																																		.							.	.	.																						.	.
Template Conservation		.	.	.	.	.	.																																		.							.	.	.
Template Sequence		.	.	.	.	.	.	Y	K	L	N	P	K	T	G	L	I	D	Y	N	Q	L	A	L	T	A	R	L	F	R	P	R	L	I	I	A	G	T	S	A	.	Y	A	R	L	I	D	.	.	.	Y	A	R	M	R	E	V	C	D	E	V	K	A	H	L	L	A	D	M	A	H	I	S	G	L	V	A	A	K	V	I
Template Known Secondary structure		.	.	.	.	.	.			B		T	T	T		S	B															S							S	S	.			S				.	.	.											T	T								G	G	G						T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.																																		.							.	.	.
Template SS confidence
								179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.				.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation										.	.	.	.																.																																																				.
Template Sequence		P	S	P	F	K	H	A	D	.	.	.	.	I	V	T	T	T	T	H	K	T	L	R	G	A	R	S	.	G	L	I	F	Y	R	K	G	V	K	A	V	D	P	K	T	G	R	E	I	P	Y	T	F	E	D	R	I	N	F	A	V	F	P	S	L	Q	G	G	P	H	N	H	A	I	A	A	V	A	V	A	.
Template Known Secondary structure				G	G	G	T		S	.	.	.	.						S	S	G	G	G		S		S		.								S						T	T	T																	T	T	T	T			S													.
Template Predicted Secondary structure										.	.	.	.																.																																																				.
Template SS confidence
		249	250	.	.	.	.	.	.					.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	.	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F
Query Conservation																																												.
Alig confidence		.	.	.	.																																							.																																					.
Template Conservation		.	.	.	.																																																																												.
Template Sequence		.	.	.	.	L	K	Q	A	C	T	P	M	F	R	E	Y	S	L	Q	V	L	K	N	A	R	A	M	A	D	A	L	L	E	R	G	Y	S	L	V	S	G	G	T	D	N	H	L	V	L	V	D	L	R	P	K	G	L	D	G	A	R	A	E	R	V	L	E	L	V	S	I	T	A	N	K	N	T	C	P	.
Template Known Secondary structure		.	.	.	.						S																								T	T				G	G	G	S		S	S	S							T	T	T	T													T	T									T	.
Template Predicted Secondary structure		.	.	.	.																																																																												.
Template SS confidence
						323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390							.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	.	.	.	.	.	.	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R	A	W
Query Conservation																			.	.	.	.	.	.
Alig confidence		.	.	.															.	.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	D	R	S	A	I	T	P	G	G	L	R	L	G	A	P	A	L	T	S	R	Q	F	R	E	D	D	F	R	R	V	V	D	F	I	D	E	G	V	N	I	G	L
Template Known Secondary structure		.	.	.	T				S	S	S		S						S						T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions