Job Description P09053 Confidence 100.00% Date Thu Jan 5 11:01:50 GMT 2012 Rank 56 Aligned Residues 358 % Identity 15% Template d1yaaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.05

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		M	E	D	L	N	D	G	L	R	T	P	G	A	I	M	L	G	G	G	.	.	.	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E
Query Conservation																					.	.	.
Alig confidence																					.	.	.																								.	.	.
Template Conservation																																															.	.	.
Template Sequence		I	K	Q	R	Y	G	Q	D	Q	R	A	T	K	V	D	L	G	I	G	A	Y	R	D	D	N	G	K	P	W	V	L	P	S	V	K	A	A	E	K	L	I	H	N	D	S	.	.	.	S	Y	N	H	E	Y	L	G	I	T	G	L	P	S	L	T	S	N	A	A	K	I	I	F	G	T	Q	S	D	A	L	Q
Template Known Secondary structure								T				S	S					S	S				B		T	T	S		B															T		T	.	.	.	T								T	T																T	T
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		97	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure						.	.																		.	.
Query SS confidence						.	.																		.	.
Query Sequence		P	Q	N	I	.	.	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	.	.	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E
Query Conservation						.	.																		.	.
Alig confidence						.	.																		.	.												.	.	.	.	.	.																									.	.	.
Template Conservation																																						.	.	.	.	.	.																									.	.	.
Template Sequence		E	D	R	V	I	S	V	Q	S	L	S	G	T	G	A	L	H	I	S	A	K	F	F	S	K	F	F	P	D	K	L	V	Y	L	S	K	.	.	.	.	.	.	P	T	W	A	N	H	M	A	I	F	E	N	Q	G	L	K	T	A	T	Y	P	Y	W	A	.	.	.	N	E	T	K	S	L	D	L	N	G	F
Template Known Secondary structure		T	T																										T	T								.	.	.	.	.	.	S			T	T							T	T	T											.	.	.	T	T	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.																									.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.							.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.
		173	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.									.	.	.	240	.
Predicted Secondary structure						.	.	.																																																													.	.	.	.	.	.	.	.
Query SS confidence						.	.	.																																																													.	.	.	.	.	.	.	.
Query Sequence		H	L	H	I	.	.	.	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	.	.	.	.	.	.	.	.	W	N	P	N	I
Query Conservation						.	.	.																																																													.	.	.	.	.	.	.	.
Alig confidence						.	.	.																																																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	A	I	Q	K	A	P	E	G	S	I	F	V	L	H	S	C	A	H	N	P	T	G	L	D	P	T	S	E	Q	W	V	Q	I	V	D	A	I	A	S	K	N	H	I	A	L	F	D	T	A	Y	Q	G	F	A	T	G	D	L	D	K	D	A	Y	A	V	R	L	G	V	E	K	L	S	T	V	S	P	V
Template Known Secondary structure								S		T	T								S	S		T	T	T																			T	T								S		T	T	T	S	S	S						T										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		242	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.												270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.
Predicted Secondary structure													.																		.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query SS confidence													.																		.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query Sequence		V	L	C	M	S	L	S	K	L	G	L	.	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	.	.	.	.	.	.	.	.	.	.	.	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	.	.	.	E	T	V	I
Query Conservation													.																		.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Alig confidence													.																		.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		F	V	C	Q	S	F	A	K	N	A	G	M	Y	G	E	R	V	G	C	F	H	L	A	L	T	K	Q	A	Q	N	K	T	I	K	P	A	V	T	S	Q	L	A	K	I	I	R	S	E	V	S	N	P	P	A	Y	G	A	K	I	V	A	K	L	L	E	T	P	E	L	T	E	Q	W	H	K	D	M	V	T	M
Template Known Secondary structure								T	T	T	S			G	G	G											S		T	T																		T	T	T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C
Query Conservation
Alig confidence																																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	R	I	T	K	M	R	H	A	L	R	D	H	L	V	K	L	G	T	P	G	N	W	D	H	I	V	N	Q	C	G	M	F	S	F	T	G	L	.	.	.	.	.	T	P	Q	M	V	K	R	L	E	E	T	H	A	V	Y	L	V	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																				T		S	S			T							S	S							.	.	.	.	.																		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.						.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		387	.	.	390	.	.	.		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		M	R	M	N	Y	V	P	.	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R
Query Conservation									.
Alig confidence		.							.
Template Conservation		.
Template Sequence		.	R	A	S	I	A	G	L	N	Q	G	N	V	E	Y	V	A	K	A	I	D	E	V	V	R	F
Template Known Secondary structure		.				G	G	G			T	T	T
Template Predicted Secondary structure		.
Template SS confidence
			386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions