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Job DescriptionP09053
Confidence99.87%DateThu Jan 5 11:01:50 GMT 2012
Rank206Aligned Residues315
% Identity13%Templated1wyub1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P)
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   66...70.. .......80.........90.........100.........110........ .120.........130....
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Query Sequence  ALCNYDG. . . PQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFA. . . . . . . . GRRADGRVKKVLFPLA
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Template Sequence  DLHPYQDPRTAQGALRLMWELGEYLKALTG. . MDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDS. . . . .
Template Known Secondary structure  S

TTS
GGG
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S


SSTT
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   92.......100.........110.........120. ........130.........140.........150.........160....
 
   135....140.........150.........160.........170.........180.........190.........200.........210....
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Query Sequence  PEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIP
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Template Sequence  . AHGSNPATASMAGYQVREIPS. . . . . GPEGEVDLEALKRELGPHVAALMLTNPNTLGLFERR. . . ILEISRLCKEAGVQ
Template Known Secondary structure  .S
TTT

B.....
TTSSB

STT
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TTS


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   165....170.........180..... ....190.........200.........210.........220. ........230.....
 
   215....220.........230.........240.........250... ......260.........270
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Query Sequence  LVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLP. . . . . GSRCGIIIANEKIITAI. . . . . . . . . . . . . . . . . . .
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Template Sequence  LYYDGANLNAIMGWARPGDMGFD. . . . VVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRP
Template Known Secondary structure  GGGGGGTTTT

T
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TTTTT



TTS






GGGGGG

S

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T
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   236...240.........250........ .260.........270.........280.........290.........300.........310.
 
   271........280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  TNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPI
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Template Sequence  KSIGRVRSFYGNFLALVRAWAYI. . . . . . RTLGLEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEGF
Template Known Secondary structure  T



SSSTTS
......TT
B
SS
SS

S
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   312.......320.........330.... .....340.........350.........360.........370.........380.....
 
   351........360.........370.........380.........390.. .......400.........410....
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Query Sequence  TTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYV. . PEPEKIEAGVKILAEEIERAWA
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Template Sequence  RALDLAKGLLELGFHPPTVYF. . . . . . . . PLIVKEALMVEPTETEAKETLEAFAEAMGALLKKPKE
Template Known Secondary structure 
TT



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   386...390.........400...... ...410.........420.........430.........440...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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