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Job DescriptionP09053
Confidence99.91%DateThu Jan 5 11:01:50 GMT 2012
Rank183Aligned Residues310
% Identity15%Templated1wyua1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P)
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   68.70.........80.........90.........100.........110....... ..120.........130.........140...
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Query Sequence  CNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLF. AGRRADGRVKKVLFPLAPEYIGYADA. . .
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Template Sequence  YQPEVSQGVLQATFEYQTMIAELAG. . LEIANASMYDGATALAEGVLLALRETGRMGVLVSQ. . . . . . GVHPEYRAVLRA
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SGGG
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   98.100.........110.........120.. .......130.........140.........150....... ..160.........
 
   144.....150.........160.........170.........180.........190.........200.........210.........220..
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Query Sequence  . GLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYG
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Template Sequence  YLEAVGAKLLTLP. . . . . . LEGGRTPLP. . . . EVGEEVGAVVVQNP. NFLGALED. . . LGPFAEAAHGAGALFVAVADPL
Template Known Secondary structure  TT

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Query Sequence  VPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITA. . . . . . . . . . . . . . . . . . . . . . . ITNMNGIISL
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Template Sequence  SLGVLKPPGAYGADIAVGDGQSLGLPMGFGGP. HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAK
Template Known Secondary structure  GGGTS

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   236...240.........250.........260....... ..270.........280.........290.........300.........310....
 
   280.........290.........300.........310.........320.........330.........340.........350.........
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Query Sequence  APGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTKQLYQRL
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Template Sequence  AKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFAL. ALPKDPEAVRRAL
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   315....320.........330.........340.........350.........360.........370.........380 .........390...
 
   360.........370.........380.........390.. .......400.........
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Query Sequence  KARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYV. . PEPEKIEAGVKILAEEI
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Template Sequence  AERGFHGATPVP. . . . . . . . REYGENLALFAATELHEEEDLLALREALKEVL
Template Known Secondary structure  TT





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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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