Return to main results Retrieve Phyre Job Id

Job DescriptionP09053
Confidence100.00%DateThu Jan 5 11:01:50 GMT 2012
Rank82Aligned Residues327
% Identity11%Templated1vjoa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  PAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAG
Query Conservation 
                             
    
   

 


  
          
 
  
 
 
 

      
  
Alig confidence 













...........





























.























Template Conservation 


      
  
 ...........                      

   
  .    
  
 


 
   

  
  
Template Sequence  PGPSNAHPSVLQAX. . . . . . . . . . . NVSPVGHLDPAFLALXDEIQSLLRYVWQTE. NPLTIAVSGTGTAAXEATIANAVE
Template Known Secondary structure  SS




...........SS



TTST

.
S
SS


Template Predicted Secondary structure 






...........










.







Template SS confidence 















































































   28.30.........40. ........50.........60.........70. ........80.........90.....
 
   120.........130.........140... ......150.........160.........170........ .180.........190......
Predicted Secondary structure 








..

















.








Query SS confidence 























. .


































.

















Query Sequence  RRADGRVKKVLFPLAPEYIGYADA. . GLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGE. ETGMICVSRPTNPTGNVI
Query Conservation   
  
     
    
 
      ..    
                       
      .    
 
  
 



   
Alig confidence 








......








..












.....
















.

















Template Conservation   

 

   ......               
        .....      
 
 
  

       
      
  
   
Template Sequence  PGDVVLIGV. . . . . . AGYFGNRLVDXAGRYGADVRTISK. . . . . PWGEVFSLEELRTALETHRPAILALVHAETSTGARQ
Template Known Secondary structure  TT
......SSTT

.....
TT





SSTTTT
Template Predicted Secondary structure 



......





.....
















Template SS confidence 















































































   96...100.... .....110.........120........ .130.........140.........150.........160....
 
   197..200.........210.........220.........230.........240.........250.........260.........270......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  TDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGI
Query Conservation         
          

 
  
                    
   
 

    
 
 
                  
Alig confidence 
...



































.....


































Template Conservation   ...   
  
         

                 
.....    
  
      
 
                  
Template Sequence  P. . . LEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVD. . . . . LAYSCSQKGLGCSPGASPFTXSSRAIEKLQRRRTK
Template Known Secondary structure 
...
TTT

TTTTTTS


TTTTT
S.....

SSSTT
S
SS

T
SS
Template Predicted Secondary structure  ...

















.....














Template SS confidence 















































































   165 ....170.........180.........190.........200. ........210.........220.........230......
 
   277 ..280.........290.........300.........310.........320.........330......
Predicted Secondary structure 
....................















Query SS confidence 
. . . . . . . . . . . . . . . . . . . .


























































Query Sequence  I. . . . . . . . . . . . . . . . . . . . SLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPE
Query Conservation   ....................        
      
                           
   
         
 
Alig confidence 
....................
















..



























.










Template Conservation                         
              ..                        
   .           
Template Sequence  VANWYLDXNLLGKYWGSERVYHHTAPINLYYALREALR. . LIAQEGLANCWQRHQKNVEYLWERLEDI. GLSLHVEKEYR
Template Known Secondary structure 
S
STT
STT



S


..
T.T

BSS
GGGB
Template Predicted Secondary structure 


















..
.







Template SS confidence 















































































   237..240.........250.........260.........270.... .....280.........290.........300.. .......310...
 
   337..340.........350......... 360.........370.........380.........390 .........400.........410
Predicted Secondary structure 







.
















...



Query SS confidence 






















.






























. . .



















Query Sequence  GAIFLWLWFKDLPITTKQLYQRL. KARGVLMVPGHNFFPGLDKPWPHTHQCMRMN. . . YVPEPEKIEAGVKILAEEIE
Query Conservation   
      
         
   
.   

 
 

  
              



...     
 
  

 

  

 
Alig confidence 










.










.












.........








...



















Template Conservation             .  
       
    

 
  
   .........     



      
 


   
  
   

Template Sequence  LPTLTTVCIPD. GVDGKAVARRLLNEHNIEVGGGLGE. . . . . . . . . LAGKVWRVGLXGFNSRKESVDQLIPALEQVLR
Template Known Secondary structure 
SS

T.T





GG.........GTTT

GGG
S
Template Predicted Secondary structure 



.








.........










Template SS confidence 













































































   314.....320.... .....330.........340......... 350.........360.........370.........380.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions