Job Description P09053 Confidence 100.00% Date Thu Jan 5 11:01:50 GMT 2012 Rank 82 Aligned Residues 327 % Identity 11% Template d1vjoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.70

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.																															.
Template Sequence		P	G	P	S	N	A	H	P	S	V	L	Q	A	X	.	.	.	.	.	.	.	.	.	.	.	N	V	S	P	V	G	H	L	D	P	A	F	L	A	L	X	D	E	I	Q	S	L	L	R	Y	V	W	Q	T	E	.	N	P	L	T	I	A	V	S	G	T	G	T	A	A	X	E	A	T	I	A	N	A	V	E
Template Known Secondary structure		S	S													.	.	.	.	.	.	.	.	.	.	.	S	S					T	T	S																			T			.		S						S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.												.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																										.	.																																				.
Query SS confidence																										.	.																																				.
Query Sequence		R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	.	.	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	.	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I
Query Conservation																										.	.																																				.
Alig confidence											.	.	.	.	.	.										.	.														.	.	.	.	.																		.
Template Conservation											.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		P	G	D	V	V	L	I	G	V	.	.	.	.	.	.	A	G	Y	F	G	N	R	L	V	D	X	A	G	R	Y	G	A	D	V	R	T	I	S	K	.	.	.	.	.	P	W	G	E	V	F	S	L	E	E	L	R	T	A	L	E	T	H	R	P	A	I	L	A	L	V	H	A	E	T	S	T	G	A	R	Q
Template Known Secondary structure		T	T								.	.	.	.	.	.	S	S													T	T									.	.	.	.	.		T	T																		S						S			T	T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I
Query Conservation
Alig confidence			.	.	.																																					.	.	.	.	.
Template Conservation			.	.	.																																					.	.	.	.	.
Template Sequence		P	.	.	.	L	E	G	V	G	E	L	C	R	E	F	G	T	L	L	L	V	D	T	V	T	S	L	G	G	V	P	I	F	L	D	A	W	G	V	D	.	.	.	.	.	L	A	Y	S	C	S	Q	K	G	L	G	C	S	P	G	A	S	P	F	T	X	S	S	R	A	I	E	K	L	Q	R	R	R	T	K
Template Known Secondary structure			.	.	.		T	T									T								T	T	T	T	T	T	S				T	T	T	T	T		S	.	.	.	.	.						S	S	S	T	T		S		S	S																T		S	S
Template Predicted Secondary structure			.	.	.																																					.	.	.	.	.
Template SS confidence
		165				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		277																					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.																													.
Template Conservation																																								.	.																													.
Template Sequence		V	A	N	W	Y	L	D	X	N	L	L	G	K	Y	W	G	S	E	R	V	Y	H	H	T	A	P	I	N	L	Y	Y	A	L	R	E	A	L	R	.	.	L	I	A	Q	E	G	L	A	N	C	W	Q	R	H	Q	K	N	V	E	Y	L	W	E	R	L	E	D	I	.	G	L	S	L	H	V	E	K	E	Y	R
Template Known Secondary structure			S		S	T	T										S	T	T					S																.	.																												T	.	T			B	S	S		G	G	G	B
Template Predicted Secondary structure																																								.	.																													.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390				.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure																									.																																.	.	.
Query SS confidence																									.																																.	.	.
Query Sequence		G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	.	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	.	.	.	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E
Query Conservation																									.																																.	.	.
Alig confidence													.												.														.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation													.																										.	.	.	.	.	.	.	.	.
Template Sequence		L	P	T	L	T	T	V	C	I	P	D	.	G	V	D	G	K	A	V	A	R	R	L	L	N	E	H	N	I	E	V	G	G	G	L	G	E	.	.	.	.	.	.	.	.	.	L	A	G	K	V	W	R	V	G	L	X	G	F	N	S	R	K	E	S	V	D	Q	L	I	P	A	L	E	Q	V	L	R
Template Known Secondary structure			S	S								T	.	T																							G	G	.	.	.	.	.	.	.	.	.	G	T	T	T								G	G	G		S
Template Predicted Secondary structure													.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.										350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions