Job Description P09053 Confidence 99.91% Date Thu Jan 5 11:01:50 GMT 2012 Rank 182 Aligned Residues 349 % Identity 10% Template d1s0aa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.71

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		32	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	I	M	L	G	G	G	N	.	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F
Query Conservation										.
Alig confidence										.																								.	.	.	.	.	.																							.	.
Template Conservation																																		.	.	.	.	.	.																							.	.
Template Sequence		L	V	D	G	M	S	S	W	W	A	A	I	H	G	Y	N	H	P	Q	L	N	A	A	M	K	S	Q	I	D	A	M	S	.	.	.	.	.	.	H	V	M	F	G	G	I	T	H	A	P	A	I	E	L	C	R	K	L	V	A	M	.	.	T	P	Q	P	L	E	C	V	F	L	A	D	S	G	S	V	A	V
Template Known Secondary structure					S	S	T	T	T	T	T		T	T		B	S																S	.	.	.	.	.	.					S	S																	.	.	S		T	T								S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.																							.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		111	.	.	.	.	.	.	.								.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.															150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	L	F	N	L	F	A	.	.	.	.	.	.	.	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V
Query Conservation										.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.												.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		E	V	A	M	K	M	A	L	Q	Y	W	Q	A	K	G	E	A	R	Q	R	F	L	T	F	R	N	.	.	.	.	.	.	G	Y	H	G	D	T	F	G	A	M	S	V	C	D	P	D	N	S	M	H	S	L	W	K	G	Y	L	P	E	N	L	F	A	P	A	P	Q	S	R	M	G	E	W	D	E	R	D	M
Template Known Secondary structure																T										T	T	.	.	.	.	.	.					S	S					T	T	S		T	T	T	T	T	G	G	G	G	T	T	T	S											S	B						G	G	G	G
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure									.	.	.																					.	.
Query SS confidence									.	.	.																					.	.
Query Sequence		D	F	E	H	L	H	I	.	.	.	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	.	.	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C
Query Conservation									.	.	.																					.	.
Alig confidence									.	.	.																					.	.																																																.
Template Conservation																																																																																	.
Template Sequence		V	G	F	A	R	L	M	A	A	H	R	H	E	I	A	A	V	I	I	E	P	I	V	Q	G	A	G	G	M	R	M	Y	H	P	E	W	L	K	R	I	R	K	I	C	D	R	E	G	I	L	L	I	A	D	E	I	A	T	G	F	G	R	T	G	K	L	F	A	C	E	H	A	E	I	A	P	D	I	L	.
Template Known Secondary structure												T	T	T								S	S				T	T	T				B		T														T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y
Query Conservation
Alig confidence		.																																																																															.
Template Conservation		.																																																																															.
Template Sequence		.	C	L	G	A	L	T	G	G	T	M	T	L	S	A	T	L	T	T	R	E	V	A	E	T	I	S	N	G	E	A	G	C	F	M	H	G	P	T	F	M	G	N	P	L	A	C	A	A	A	N	A	S	L	A	I	L	E	S	G	D	W	Q	Q	Q	V	A	D	I	E	V	Q	L	R	E	Q	L	A	P	.
Template Known Secondary structure		.					T	T	S	S	S	S																	T	S	T	T	S	S		S				T	T	T	T																	T																			G	G	.
Template Predicted Secondary structure		.																																																																															.
Template SS confidence
			271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	.	.	Y	V	P	E	P	E	K	I	E	A	G	V
Query Conservation																																																																				.	.
Alig confidence																									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.
Template Conservation																									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	D	A	E	M	V	A	D	V	R	V	L	G	A	I	G	V	V	E	T	T	H	.	P	V	N	M	A	A	L	Q	K	F	F	V	E	Q	G	V	W	I	R	P	F	G	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	L	M	P	P	Y	I	I	L	P	Q	Q	L	Q	R	L	T
Template Known Secondary structure		G	G	G		T	T								T	T							S	S	.		B												T	T						B	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																									.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.															.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		403	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	L	A	E	E	I	E	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	V	N	R	A	V	Q	D	E
Template Known Secondary structure								T	S	S	G
Template Predicted Secondary structure
Template SS confidence
		415	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions