Job Description P09053 Confidence 99.97% Date Thu Jan 5 11:01:50 GMT 2012 Rank 91 Aligned Residues 341 % Identity 13% Template d1qz9a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.85

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A
Query Conservation
Alig confidence											.	.																											.	.																									.	.
Template Conservation											.	.																											.	.																									.	.
Template Sequence		E	G	V	I	Y	L	D	G	N	.	.	S	L	G	A	R	P	V	A	A	L	A	R	A	Q	A	V	I	A	E	E	W	G	N	G	L	I	.	.	R	S	W	N	S	A	G	W	R	D	L	S	E	R	L	G	N	R	L	A	T	L	I	G	.	.	A	R	D	G	E	V	V	V	T	D	T	T	S	I	N
Template Known Secondary structure		T	T						T	T	.	.	T	S				B	T	T											T						G	G	.	.	G					T	S	G	G	G											T	T	T	T	.	.			T	T	S					S
Template Predicted Secondary structure											.	.																											.	.																									.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		110	.	.	.	.	.	.	.								.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure										.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.
Query Sequence		F	F	Y	L	F	N	L	F	.	.	.	.	.	.	.	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M
Query Conservation										.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.												.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.																												.	.	.	.	.	.
Template Sequence		L	F	K	V	L	S	A	A	L	R	V	Q	A	T	R	S	P	E	R	R	V	I	V	T	E	T	.	.	.	.	.	.	S	N	F	P	T	D	L	Y	I	A	E	G	L	A	D	M	L	Q	Q	G	Y	T	L	R	L	V	D	.	.	.	.	.	.	S	P	E	E	L	P	Q	A	I	D	Q	D	T	A	V
Template Known Secondary structure																	S	T	T								T	.	.	.	.	.	.	T	S																	S	S							S	.	.	.	.	.	.	S	G	G	G						S	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.																												.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	.	P	G	S	R	C	G	I	I	I
Query Conservation																																																																								.
Alig confidence																	.	.	.																																					.	.	.	.	.												.
Template Conservation																	.	.	.																																					.	.	.	.	.
Template Sequence		V	M	L	T	H	V	N	Y	K	T	G	Y	M	H	D	.	.	.	M	Q	A	L	T	A	L	S	H	E	C	G	A	L	A	I	W	D	L	A	H	S	A	G	A	V	P	V	D	L	H	Q	A	G	A	D	.	.	.	.	.	Y	A	I	G	C	T	Y	K	Y	L	N	G	G	P	G	S	Q	A	F	V	W
Template Known Secondary structure						S	B		T	T	T		B	B			.	.	.												T								T	T	T	T	T	T	S								T		S	.	.	.	.	.						S	S	S	T	T				T	T
Template Predicted Secondary structure																	.	.	.																																					.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		262	.	.	.	.	.	.	.	270	.																								.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	E	K	I	I	T	A	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.
Template Conservation																																																										.	.
Template Sequence		V	S	P	Q	L	C	D	L	V	P	Q	P	L	S	G	W	F	G	H	S	R	Q	F	A	M	E	P	R	Y	E	P	S	N	G	I	A	R	Y	L	C	G	T	Q	P	I	T	S	L	A	M	V	E	C	G	L	D	.	.	V	F	A	Q	T	D	M	A	S	L	R	R	K	S	L	A	L	T	D	L	F	I
Template Known Secondary structure				T	T	T	T	T	T	S			S				G	G	G	B		T	T	S				S	S			B		S	S	G	G	G	G			S																.	.			T	T	S
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	.	.	.	E	P
Query Conservation																																																																													.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	V	E	Q	R	C	A	A	H	E	L	T	L	V	T	P	R	E	H	A	K	R	G	S	H	V	S	F	E	H	P	E	G	Y	A	V	I	Q	A	L	I	D	R	G	V	I	G	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	P	R	I	M	R	F	G	F	T	P	L	Y	T	T	F
Template Known Secondary structure									T	T	S						S		S	S	G	G	G	B		S							T	T										T	T	T						.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T								T	T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.														.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	V	W	D	A	V	Q	I	L	G	E	I	L	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions