Job Description P09053 Confidence 99.92% Date Thu Jan 5 11:01:50 GMT 2012 Rank 180 Aligned Residues 328 % Identity 11% Template d1o69a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.84

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																																											.
Query SS confidence																											.	.																																											.
Query Sequence		Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	.	.	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	.	A	G	R	R	A	D	G	R	V	K
Query Conservation																											.	.																																											.
Alig confidence												.	.	.	.	.	.	.	.								.	.													.	.	.	.	.	.	.	.																							.
Template Conservation												.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		L	K	Y	I	E	E	V	F	K	S	.	.	.	.	.	.	.	.	N	Y	I	A	P	L	G	E	F	V	N	R	F	E	Q	S	V	K	D	Y	S	.	.	.	.	.	.	.	.	K	S	E	N	A	L	A	L	N	S	A	T	A	A	L	H	L	A	L	R	V	A	G	V	K	Q	D	D	I	V	L	A	S
Template Known Secondary structure												.	.	.	.	.	.	.	.	T	T	T	S		T	T															.	.	.	.	.	.	.	.			S						S													T	T			T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.									.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L
Query Conservation
Alig confidence			.	.	.	.	.	.																							.	.	.	.	.																																					.	.	.
Template Conservation			.	.	.	.	.	.																							.	.	.	.	.																																					.	.	.
Template Sequence		S	.	.	.	.	.	.	F	T	F	I	A	S	V	A	P	I	C	Y	L	K	A	K	P	V	F	I	D	C	.	.	.	.	.	D	E	T	Y	N	I	D	V	D	L	L	K	L	A	I	K	E	C	E	K	K	P	K	A	L	I	L	T	H	L	Y	G	N	A	A	K	.	.	.	M	D	E	I	V	E	I
Template Known Secondary structure		S	.	.	.	.	.	.	S	S		G	G	G	T						T	T								B	.	.	.	.	.		T	T	S	S	B													S	S										G	G	G					.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.																							.	.	.	.	.																																					.	.	.
Template SS confidence
		79							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.												.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	.	.	.	.	.	.	.	.	.	.	.	I
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.
Template Sequence		C	K	E	N	D	I	V	L	I	E	D	A	A	E	A	L	G	S	F	Y	K	N	K	A	L	G	T	F	G	E	F	.	.	G	V	Y	S	Y	N	G	N	K	I	I	T	T	S	G	G	G	M	L	I	G	K	N	K	E	K	I	E	K	A	R	F	Y	S	T	Q	A	R	E	N	C	L	H	Y	E	H	L
Template Known Secondary structure					T	T								T	T		T	T				T	T			T	T	S	S	S	S		.	.							T	T	S	S	S			S	S							S												T	B	T				S	S	S	S				S
Template Predicted Secondary structure																																	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.			.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.																	.	.	.	.	.	340
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	G	A	I	F
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	G	Y	N	Y	R	L	S	N	V	L	G	A	I	G	V	A	Q	M	E	V	L	E	Q	R	V	L	K	K	R	E	I	Y	E	W	Y	K	E	F	L	G	E	Y	F	S	F	L	D	E	L	E	N	S	R	S	N	R	W	L	S	T	A	L	I	N	F	D	K	N	E	L	N	A	C	Q	K	D	I	N
Template Known Secondary structure		S				B		B														T	T																				T	T	T								T	T						S	S						S			G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.												.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.								.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.								.	.
Query Sequence		L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	.	.	.	.	.	.	.	.	.	.	.	M	R	M	N	Y	V	P	.	.	E	P	E	K	I	E	A	G	V	K	I	L	A	E
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.								.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation
Template Sequence		I	S	Q	K	N	I	T	L	H	P	K	I	S	K	L	I	E	D	L	K	N	K	Q	I	E	T	R	P	L	W	K	A	M	H	T	Q	E	V	F	K	G	A	K	A	Y	L	N	G	N	S	E	L	F	F	Q	K	G	I	C	L	P	S	G	T	A	M	S	K	D	D	V	Y	E	I	S	K	L	I	L	K
Template Known Secondary structure																							T	T				B						G	G	G		G	G	G	T	T							S																T	T
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		408	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		383	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions