Job Description P09053 Confidence 99.95% Date Thu Jan 5 11:01:50 GMT 2012 Rank 135 Aligned Residues 336 % Identity 12% Template d1mdoa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.70

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	.	A
Query Conservation																																																																																.
Alig confidence																								.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																							.
Template Conservation																								.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		P	F	S	R	P	A	X	G	A	E	E	L	A	A	V	K	T	V	L	D	S	G	.	.	.	.	.	.	.	W	I	T	T	G	P	K	N	Q	E	L	E	A	A	F	C	R	L	T	.	.	.	.	.	.	.	.	G	N	Q	Y	A	V	A	V	S	S	A	T	A	G	X	H	I	A	L	X	A	L	G	I
Template Known Secondary structure			S																				T	.	.	.	.	.	.	.			S	S	S															.	.	.	.	.	.	.	.			S						S													T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.								.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D
Query Conservation
Alig confidence												.	.	.	.	.	.																							.	.	.	.																						.	.	.														.
Template Conservation												.	.	.	.	.	.																							.	.	.	.																						.	.	.														.
Template Sequence		G	E	G	D	E	V	I	T	P	S	.	.	.	.	.	.	X	T	W	V	S	T	L	N	X	I	V	L	L	G	A	N	P	V	X	V	D	V	.	.	.	.	D	R	D	T	L	X	V	T	P	E	H	I	E	A	A	I	T	P	Q	T	K	.	.	.	A	I	I	P	V	H	Y	A	G	A	P	A	D	.
Template Known Secondary structure			T	T							S	.	.	.	.	.	.	S	S											T	T								B	.	.	.	.		T	T	T			B											T	T			.	.	.					B		G	G	G					.
Template Predicted Secondary structure												.	.	.	.	.	.																							.	.	.	.																						.	.	.														.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.																								.	.	.																																																		.	.	.
Template Conservation		.	.																								.	.	.
Template Sequence		.	.	L	D	A	I	Y	A	L	G	E	R	Y	G	I	P	V	I	E	D	A	A	H	A	T	.	.	.	G	T	S	Y	K	G	R	H	I	G	A	R	G	T	A	I	F	S	F	H	A	I	K	N	I	T	C	A	E	G	G	I	V	V	T	D	N	P	Q	F	A	D	K	L	R	S	L	K	F	H	G	L
Template Known Secondary structure		.	.												T			B					T	T		T	.	.	.	T				T	T			T	T	S	S	S								T	T	S	S	S		S	S	S							S												T	B	T	T
Template Predicted Secondary structure		.	.																								.	.	.
Template SS confidence
				143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
									276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	D	Q	A	E	V	L	A	P	G	Y	K	Y	N	L	P	D	L	N	A	A	I	A	L	A	Q	L	Q	K	L	D	A	L	N	A	R	R	A	A	I	A	A	Q	Y	H	Q	A	X	A	D	L	P	F	Q	P	L	S	L	P	S	W	E	H	I	H	A	W	H	L	F	I	I	R	V	D	E	A	R	C
Template Known Secondary structure									S	S				B																	T																					T	S	S								S	S							S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.													.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Query Sequence		P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	.	.	.	.	.	.	.	.	.	.	.	.	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	.	.	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation
Template Sequence		G	I	T	R	D	A	L	X	A	S	L	K	T	K	G	I	G	T	G	L	H	F	R	A	A	H	T	Q	K	Y	Y	R	E	R	F	P	T	L	T	L	P	D	T	E	W	N	S	E	R	I	C	S	L	P	L	F	P	D	X	T	E	S	D	F	D	R	V	I	T	A	L	H	Q	I	A
Template Known Secondary structure		S	S												T	T	B			B						G	G	G	S							S	T	T											T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions