Job Description P09053 Confidence 100.00% Date Thu Jan 5 11:01:50 GMT 2012 Rank 74 Aligned Residues 343 % Identity 16% Template d1lc5a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.46

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		20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		M	E	D	L	N	D	G	L	R	T	P	.	.	G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P
Query Conservation													.	.
Alig confidence													.	.																	.	.											.	.	.	.	.	.										.														.	.	.	.	.	.
Template Conservation																															.	.											.	.	.	.	.	.										.														.	.	.	.	.	.
Template Sequence		I	R	E	P	A	T	V	L	G	I	S	P	D	Q	L	L	D	F	S	A	N	I	N	P	L	G	M	P	V	.	.	S	V	K	R	A	L	I	D	N	L	.	.	.	.	.	.	D	C	I	E	R	Y	P	D	A	.	D	Y	F	H	L	H	Q	A	L	A	R	H	H	.	.	.	.	.	.	Q	V	P	A
Template Known Secondary structure										T	S		G	G	G	S				S	S				T	T					.	.									T	G	.	.	.	.	.	.	G	G	G	G	S				T	.	T													.	.	.	.	.	.	T	S		G
Template Predicted Secondary structure																															.	.											.	.	.	.	.	.										.														.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50							.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.							.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G
Query Conservation
Alig confidence																						.	.										.	.	.	.	.	.																							.	.	.	.
Template Conservation																						.	.										.	.	.	.	.	.																							.	.	.	.
Template Sequence		S	W	I	L	A	G	N	G	E	T	E	S	I	F	T	V	A	S	G	L	.	.	K	P	R	R	A	M	I	V	T	.	.	.	.	.	.	P	G	F	A	E	Y	G	R	A	L	A	Q	S	G	C	E	I	R	R	W	S	L	.	.	.	.	R	E	A	D	G	W	Q	L	T	D	A	I	L	E	A	L	T
Template Known Secondary structure		G	G					S	S													.	.			S							.	.	.	.	.	.	S			T									T	T									.	.	.	.		G	G	G	T	T				T	T
Template Predicted Secondary structure																						.	.										.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.							.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	.	L	G	L	P	G	S	R
Query Conservation																																																																										.
Alig confidence																																																																										.
Template Conservation
Template Sequence		P	D	L	D	C	L	F	L	C	T	P	N	N	P	T	G	L	L	P	E	R	P	L	L	Q	A	I	A	D	R	C	K	S	L	N	I	N	L	I	L	D	E	A	F	I	D	F	I	P	H	E	T	G	F	I	P	A	L	K	D	N	P	H	I	W	V	L	R	S	L	T	K	F	Y	A	I	P	G	L	R
Template Known Secondary structure		T	T								S	S		T	T	T																				T								T	T	G	G	G	S	T	T				S	G	G	G		T	T		T	T							S	T	T	T	T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E
Query Conservation
Alig confidence																						.																		.	.	.	.																										.	.	.	.
Template Conservation																						.																		.	.	.	.																										.	.	.	.
Template Sequence		L	G	Y	L	V	N	S	D	D	A	A	M	A	R	M	R	R	Q	Q	M	.	P	W	S	V	N	A	L	A	A	L	A	G	E	V	A	L	Q	.	.	.	.	D	S	A	W	Q	Q	A	T	W	H	W	L	R	E	E	G	A	R	F	Y	Q	A	L	C	Q	.	.	.	.	L	P	L	L	T	V	Y	P	G
Template Known Secondary structure																				S		.	T	T		S											G	G	G	.	.	.	.																									T	.	.	.	.	S	T	T
Template Predicted Secondary structure																						.																		.	.	.	.																										.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.					.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I
Query Conservation
Alig confidence												.	.	.																								.	.	.	.	.	.	.														.
Template Conservation												.	.	.																								.	.	.	.	.	.	.														.
Template Sequence		R	A	N	Y	L	L	L	R	C	E	.	.	.	R	E	D	I	D	L	Q	R	R	L	L	T	Q	R	I	L	I	R	S	C	A	N	Y	.	.	.	.	.	.	.	P	G	L	D	S	R	Y	Y	R	V	A	I	R	.	S	A	A	Q	N	E	R	L	L	A	A	L	R	N	V	L
Template Known Secondary structure		S	S	S							S	.	.	.		T	T									T	T	T							T	T	S	.	.	.	.	.	.	.	T	T			T	T								.
Template Predicted Secondary structure												.	.	.																								.	.	.	.	.	.	.														.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.								.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions