Job Description P09053 Confidence 100.00% Date Thu Jan 5 11:01:50 GMT 2012 Rank 17 Aligned Residues 364 % Identity 16% Template d1iaya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																								.	.																													.	.
Query SS confidence																																								.	.																													.	.
Query Sequence		L	R	T	P	G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	.	.	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	.	.	W	D	I	E	P	Q	N	I	A	L
Query Conservation																																								.	.																													.	.
Alig confidence																	.	.	.																					.	.																													.	.
Template Conservation																	.	.	.
Template Sequence		K	N	P	N	G	V	I	Q	M	G	L	A	E	N	Q	.	.	.	L	C	L	D	L	I	E	D	W	I	K	R	N	P	K	G	S	I	C	S	S	F	K	A	I	A	N	F	Q	D	Y	H	G	L	P	E	F	R	K	A	I	A	K	F	M	E	K	T	R	G	G	R	V	R	F	D	P	E	R	V	V	M
Template Known Secondary structure		S	S	T	T	S	B				S	S					.	.	.	S	S												T	T	S	S	T	T												T	T																	T	T	T		S				T	T	S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																							.	.	.	.	.	.																					.	.																												.	.	.	.
Template Conservation																							.	.	.	.	.	.																					.	.
Template Sequence		A	G	G	A	T	G	A	N	E	T	I	I	F	C	L	A	D	P	G	D	A	.	.	.	.	.	.	F	L	V	P	S	P	Y	Y	P	A	F	N	R	D	L	R	W	R	T	G	.	.	V	Q	L	I	P	I	H	C	E	S	S	N	N	F	K	I	T	S	K	A	V	K	E	A	Y	E	N	A	Q	K	S
Template Known Secondary structure																			T	T			.	.	.	.	.	.					S	S			T	T					T	T	T	T	T		.	.										T	T	T	T	T																	T
Template Predicted Secondary structure																							.	.	.	.	.	.																					.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.							.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
				179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.											.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	.	.	.	.	.	.	.	.	.	.	W	N	P	N	I	V	L	C	M	S
Query Conservation		.	.																																																											.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	K	V	K	G	L	I	L	T	N	P	S	N	P	L	G	T	T	L	D	K	D	T	L	K	S	V	L	S	F	T	N	Q	H	N	I	H	L	V	C	D	E	I	Y	A	A	T	V	F	D	T	P	Q	F	V	S	I	A	E	I	L	D	E	Q	E	M	T	Y	C	N	K	D	L	V	H	I	V	Y	S
Template Known Secondary structure		T										S	S		T	T	T																		T	T	T								T	T	G	G	G			S	S	S										T	S	G	G	G	T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		247	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		L	S	K	L	G	L	.	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L
Query Conservation								.
Alig confidence								.																							.																																																	.	.
Template Conservation																															.																																																	.	.
Template Sequence		L	S	K	D	M	G	L	P	G	F	R	V	G	I	I	Y	S	F	N	D	D	V	V	N	C	A	R	K	M	.	S	S	F	G	L	V	S	T	Q	T	Q	Y	F	L	A	A	M	L	S	D	E	K	F	V	D	N	F	L	R	E	S	A	M	R	L	G	K	R	H	K	H	F	T	N	G	L	E	V	.	.
Template Known Secondary structure		S	T	T	T	S	S		G	G	G								S												.		T	T	S														T	T																														.	.
Template Predicted Secondary structure																															.																																																	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.							.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.		.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.																																											.
Query SS confidence																												.	.	.	.	.	.																																											.
Query Sequence		P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	.	.	.	.	.	.	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	.	E	P	E	K	I
Query Conservation																												.	.	.	.	.	.																																											.
Alig confidence		.	.																									.	.	.	.	.	.																						.	.	.	.	.	.	.															.
Template Conservation		.	.																																																				.	.	.	.	.	.	.
Template Sequence		.	.	V	G	I	K	C	L	K	N	N	A	G	L	F	C	W	M	D	L	R	P	L	L	R	E	S	T	F	D	S	E	M	S	L	W	R	V	I	I	N	D	V	K	L	N	V	S	P	G	S	S	F	.	.	.	.	.	.	.	E	C	Q	E	P	G	W	F	R	V	C	F	A	N	M	D	D	G	T	V
Template Known Secondary structure		.	.	T	T			B				S	S	S	S							G	G	G		S	S	S	S														T	S							G	G	G	G	.	.	.	.	.	.	.	T		S	S	S	S							S	S	S
Template Predicted Secondary structure		.	.																																																				.	.	.	.	.	.	.
Template SS confidence
				353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.								.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	G	V	K	I	L	A	E	E	I	E	R	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	A	L	A	R	I	R	R	F	V	G	V	E	K
Template Known Secondary structure														T	T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions