Job Description P09053 Confidence 99.94% Date Thu Jan 5 11:01:50 GMT 2012 Rank 145 Aligned Residues 345 % Identity 12% Template d1elua_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.55

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		P	G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	.	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S
Query Conservation																		.
Alig confidence																		.																														.													.	.	.	.	.	.
Template Conservation																																																.													.	.	.	.	.	.
Template Sequence		A	N	K	T	Y	F	N	F	G	G	Q	G	I	L	P	T	V	A	L	E	A	I	T	A	M	Y	G	Y	L	Q	E	N	G	P	F	S	I	A	A	N	Q	H	I	Q	Q	L	.	I	A	Q	L	R	Q	A	L	A	E	T	F	.	.	.	.	.	.	N	V	D	P	N	T	I	T	I	T	D	N	V	T	T
Template Known Secondary structure		T	T	S					T	T	T																								S	S	S											.												T	.	.	.	.	.	.	T	S		G	G	G					S	S
Template Predicted Secondary structure																																																.													.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.							.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		109	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	F	F	Y	L	F	N	L	F	.	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R
Query Conservation											.
Alig confidence											.																	.	.																					.	.	.
Template Conservation																												.	.																					.	.	.
Template Sequence		G	C	D	I	V	L	W	G	L	D	W	H	Q	G	D	E	I	L	L	T	D	C	E	H	P	G	.	.	I	I	A	I	V	Q	A	I	A	A	R	F	G	I	T	Y	R	F	F	P	.	.	.	V	A	A	T	L	N	Q	G	D	A	A	A	V	L	A	N	H	L	G	P	K	T	R	L	V	I	L	S	H
Template Known Secondary structure										S				T	T							T	T					.	.																					.	.	.		G	G	G	S	S	S	S								T	T			T	T								S
Template Predicted Secondary structure																												.	.																					.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	.	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I
Query Conservation																				.
Alig confidence																				.																																.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		L	L	W	N	T	G	Q	V	L	P	L	A	E	I	M	A	V	C	R	R	H	Q	G	N	Y	P	V	R	V	L	V	D	G	A	Q	S	A	G	S	L	P	L	D	F	S	R	L	E	V	D	.	.	.	.	.	Y	Y	A	F	T	G	H	K	W	F	A	G	P	A	G	V	G	G	L	Y	I	H	G	D	C
Template Known Secondary structure		B		T	T	T			B															S	S	S									T	T	T	B	T	T	B				T	T	T	S			S	.	.	.	.	.						S	S	S	T	T				T	T								T	T	T
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.						.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		267	.	.	270																						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.
Template Conservation																																																																																	.
Template Sequence		L	G	E	I	N	P	T	Y	V	G	W	R	S	I	T	Y	G	A	K	G	E	P	T	G	W	A	E	G	G	K	R	F	E	V	A	T	S	A	Y	P	Q	Y	A	G	L	L	A	A	L	Q	L	H	Q	R	Q	G	T	A	E	E	R	Y	Q	A	I	C	Q	R	S	E	F	L	W	R	G	L	N	Q	L	.
Template Known Secondary structure		G	G	G					S			T	T	T					T	T	S							S	G	G	G	G	G			S																																												S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.	400	.
Predicted Secondary structure														.	.																																																								.	.
Query SS confidence														.	.																																																								.	.
Query Sequence		P	E	N	R	C	L	I	H	K	P	E	G	.	.	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	.	.	P	E	P	E	K	I	E	A	G
Query Conservation														.	.																																																								.	.
Alig confidence		.	.											.	.											.																							.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation		.	.																							.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	P	H	V	H	C	L	A	T	S	A	P	Q	A	G	L	V	S	F	T	V	D	S	.	P	L	G	H	R	A	I	V	Q	K	L	E	E	Q	R	I	Y	L	R	T	I	A	.	.	.	.	.	.	.	.	.	.	.	.	D	P	D	C	I	R	A	C	C	H	Y	I	T	D	E	E	E	I	N	H	L
Template Known Secondary structure		.	.	T	T				S		S	S			S	S	S								S	.	S	S												T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T								T	T
Template Predicted Secondary structure		.	.																							.																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.													.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
		402	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	I	L	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	R	L	A	D
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions