Job Description P09053 Confidence 99.95% Date Thu Jan 5 11:01:50 GMT 2012 Rank 136 Aligned Residues 322 % Identity 11% Template d1cl1a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.83

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.
Template Sequence		E	A	K	K	H	A	T	R	N	R	A	N	G	E	L	F	Y	G	R	R	G	T	L	T	H	F	S	L	Q	Q	A	M	C	E	L	E	.	.	.	.	.	.	.	.	G	G	A	G	C	V	L	F	P	C	G	A	A	A	V	A	N	S	I	L	A	F	I	E	Q	G	D	H	V	L	M	T	N	T	A	Y
Template Known Secondary structure										T	T	T	T	T					T	T	T																	.	.	.	.	.	.	.	.	T		S						S	S															T	T							T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H
Query Conservation
Alig confidence			.	.																							.	.	.	.	.	.	.	.	.	.																																									.
Template Conservation			.	.																							.	.	.	.	.	.	.	.	.	.																																									.
Template Sequence		E	.	.	P	S	Q	D	F	C	S	K	I	L	S	K	L	G	V	T	T	S	W	F	D	P	.	.	.	.	.	.	.	.	.	.	L	I	G	A	D	I	V	K	H	L	Q	P	N	T	K	I	V	F	L	E	S	P	G	S	I	T	M	E	V	H	D	V	P	A	I	V	A	A	V	R	.	S	V	V	P
Template Known Secondary structure			.	.									T	G	G	G	G	T								T	.	.	.	.	.	.	.	.	.	.	T		G	G	G	G	G	G	T			T	T								S	S		T	T	T															.				T
Template Predicted Secondary structure			.	.																							.	.	.	.	.	.	.	.	.	.																																									.
Template SS confidence
		112			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.											.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	.	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C
Query Conservation																																								.
Alig confidence																			.	.	.	.	.	.																.
Template Conservation																			.	.	.	.	.	.
Template Sequence		D	A	I	I	M	I	D	N	T	W	A	A	G	V	L	F	K	.	.	.	.	.	.	A	L	D	F	G	I	D	V	S	I	Q	A	A	T	Y	L	V	G	H	S	D	A	M	I	G	T	A	V	C	N	A	R	C	W	E	Q	L	R	E	N	A	Y	L	M	G	Q	M	V	D	A	D	T	A	Y	I	T	S
Template Known Secondary structure		T								T	T	T	T	T	T	S	S		.	.	.	.	.	.	G	G	G	G	T		S										S		S	S	S										T	T	T											T	T
Template Predicted Secondary structure																			.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.																	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																								.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation						.	.	.	.	.	.	.																								.	.																																						.
Template Sequence		R	G	L	R	.	.	.	.	.	.	.	T	L	G	V	R	L	R	Q	H	H	E	S	S	L	K	V	A	E	W	L	A	E	H	.	.	P	Q	V	A	R	V	N	H	P	A	L	P	G	S	K	G	H	E	F	W	K	R	D	F	T	G	S	S	G	L	F	S	F	V	L	K	K	.	K	L	N	N	E	E
Template Known Secondary structure					T	.	.	.	.	.	.	.	T																					T		.	.	T	T							T	T	S	T	T	S	T	T									S				S							S	S	.
Template Predicted Secondary structure						.	.	.	.	.	.	.																								.	.																																						.
Template SS confidence
		254	.	.	.								.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.
		355	.	.	.	.	360	.	.	.	.																.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	Q	R	L	K	A	R	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R	A
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Conservation																																																								.	.
Template Sequence		L	A	N	Y	L	D	N	F	S	L	F	S	M	A	Y	S	W	G	G	Y	E	S	L	I	L	A	N	Q	P	E	H	I	A	A	I	R	P	Q	G	E	I	D	F	S	G	T	L	I	R	L	H	I	G	L	.	.	E	D	V	D	D	L	I	A	D	L	D	A	G	F	A	R	I
Template Known Secondary structure							T	T		S	S		B			S				S	S	S														T	S	T	T							S									S	.	.	S																T
Template Predicted Secondary structure																																																								.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions