Job Description P09053 Confidence 99.90% Date Thu Jan 5 11:01:50 GMT 2012 Rank 187 Aligned Residues 332 % Identity 11% Template d1bjna_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.30

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																							.	.	.	.	.																									.	.
Query SS confidence																																							.	.	.	.	.																									.	.
Query Sequence		N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	.	.	.	.	.	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	.	.	I	A	L	T	N	G	S	Q	S	A	F	F
Query Conservation																																							.	.	.	.	.																									.	.
Alig confidence																																							.	.	.	.	.													.	.	.	.	.	.							.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		S	S	G	P	A	M	L	P	A	E	V	L	K	Q	A	Q	Q	E	L	R	D	W	N	G	L	G	T	S	V	M	E	V	S	H	R	G	K	E	F	I	Q	V	A	E	E	A	E	K	D	F	R	D	L	L	.	.	.	.	.	.	N	V	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A
Template Known Secondary structure			S	S	S														T	S	S	S	G	G	G	S	S	S		G	G	G	S		T	T	S																			.	.	.	.	.	.	T			T	T							S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.							.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P
Query Conservation
Alig confidence																.	.	.	.																												.	.	.	.	.
Template Conservation																.	.	.	.																												.	.	.	.	.
Template Sequence		A	V	P	L	N	I	L	G	D	K	T	T	A	D	.	.	.	.	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	T	P	N	V	F	D	A	K	.	.	.	.	.	V	T	V	D	G	L	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	M	H	Y	C	P	N	E
Template Known Secondary structure									T	T						.	.	.	.				S	S											T	T	T	S									.	.	.	.	.				T	T							G	G	G					S	S		S						S
Template Predicted Secondary structure																.	.	.	.																												.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	.
Query Conservation																																																																																	.
Alig confidence															.	.	.	.	.																										.	.	.	.	.	.	.															.	.														.
Template Conservation															.	.	.	.	.																										.	.	.	.	.	.	.															.	.
Template Sequence		T	I	D	G	I	A	I	D	E	T	P	D	F	.	.	.	.	.	G	A	D	V	V	V	A	A	D	F	S	S	T	I	L	S	R	P	I	D	V	S	R	Y	G	.	.	.	.	.	.	.	V	I	Y	A	G	A	Q	N	I	G	P	A	G	L	.	.	T	I	V	I	V	R	E	D	L	L	G	K	A	N
Template Known Secondary structure		T	T	T	T										.	.	.	.	.		T	T								T	T	T	T	T	S	S				G	G	G		S	.	.	.	.	.	.	.										S	S	T	T		.	.							G	G	G		S
Template Predicted Secondary structure															.	.	.	.	.																										.	.	.	.	.	.	.															.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.						.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.
										271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure		.	.	.	.	.	.	.	.																																	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																	.	.
Query Sequence		.	.	.	.	.	.	.	.	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	.	.	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F
Query Conservation		.	.	.	.	.	.	.	.																																	.	.
Alig confidence		.	.	.	.	.	.	.	.																																	.	.
Template Conservation
Template Sequence		I	A	C	P	S	I	L	D	Y	S	I	L	N	D	N	G	S	M	F	N	T	P	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	N	G	G	V	A	E	M	D	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	D	F	Y	R	N	D	V	A	K	R	N	R	S	R	M	N
Template Known Secondary structure		T	T	S		G	G	G								T	T	T		S	S																				T	T																								S	S					B		G	G	G	B		S	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	.	.	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R
Query Conservation																																																							.	.
Alig confidence									.																							.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation									.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	P	F	Q	L	A	D	.	S	A	L	D	K	L	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	.	.	.	.	.	.	.	.	.	.	.	R	V	V	G	G	M	R	A	S	I	Y	N	A	M	P	L	E	G	V	K	A	L	T	D	F	M	V	E	F	E	R	R
Template Known Secondary structure							S	S	.	G	G	G											T	T					B			.	.	.	.	.	.	.	.	.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure									.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.												.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions