Job Description P09053 Confidence 99.96% Date Thu Jan 5 11:01:50 GMT 2012 Rank 124 Aligned Residues 331 % Identity 13% Template c3ruyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:ornithine aminotransferase; PDBTitle: crystal structure of the ornithine-oxo acid transaminase rocd from2 bacillus anthracis Resolution 2.65 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																									.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		S	A	V	N	Q	G	H	R	H	P	.	.	.	.	.	.	.	.	K	I	I	N	A	L	I	D	Q	A	N	R	V	.	.	.	.	.	.	.	T	L	T	S	R	A	F	H	S	D	Q	L	G	P	W	Y	E	K	V	A	K	L	T	N	.	.	.	.	K	E	M	V	L	P	M	N	T	G	A	E	A	V
Template Known Secondary structure			T		T	T		B	T			.	.	.	.	.	.	.	.										T	T	T		.	.	.	.	.	.	.	S				T	T	S			S	S													T	.	.	.	.		S						S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.									60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110
		111	.	.	.	.	.	.	.										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																																	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.																																																	.	.
Query Sequence		F	Y	L	F	N	L	F	A	.	.	.	.	.	.	.	.	.	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	.	.	Y	H	V	D	F	E	H	L	H	I	G	E	E
Query Conservation										.	.	.	.	.	.	.	.	.																																																	.	.
Alig confidence										.	.	.	.	.	.	.	.	.								.	.	.	.																																						.	.
Template Conservation																										.	.	.	.
Template Sequence		E	T	A	I	K	T	A	R	R	W	A	Y	D	V	K	K	V	E	A	N	R	A	E	I	.	.	.	.	I	V	C	E	D	N	F	H	G	R	T	M	G	A	V	S	M	S	S	N	E	E	Y	K	R	G	F	G	P	M	L	P	G	I	I	V	I	P	Y	G	D	L	E	A	L	K	A	A	I	T	P	N
Template Known Secondary structure															T	S				T	T					.	.	.	.				T	T					S	S					T	T		S		T	T	T	T	T	T			S			S	S						T	T											T	T
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		T	G	M	I	C	V	S	R	P	T	N	P	T	G	.	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G
Query Conservation																.
Alig confidence																.																																																			.	.
Template Conservation																																																																			.	.
Template Sequence		T	A	A	F	I	L	E	P	I	Q	G	E	A	G	I	N	I	P	P	A	G	F	L	K	E	A	L	E	V	C	K	K	E	N	V	L	F	V	A	D	E	I	Q	T	G	L	G	R	T	G	K	V	F	A	C	D	W	D	N	V	T	P	D	M	Y	.	.	I	L	G	A	L	G	G	G	V	F	P	I	S
Template Known Secondary structure									S	S	B	T	T	T	T	S	B				T	T												T	T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S			.	.					T	T	T	T	T	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A
Query Conservation
Alig confidence																																						.	.	.	.	.																										.	.
Template Conservation																																						.	.	.	.	.																										.	.
Template Sequence		C	A	A	A	N	R	D	I	L	G	V	F	E	P	G	S	H	G	S	T	F	G	G	N	P	L	A	C	A	V	S	I	A	A	L	E	.	.	.	.	.	V	L	E	E	E	K	L	T	E	R	S	L	Q	L	G	E	K	L	V	G	Q	L	K	E	I	.	.	D	N	P	M	I	T	E	V	R	G	K	G
Template Known Secondary structure											T	T			T	T	S	S			S	S	T	T														.	.	.	.	.					T	T																	T	T		.	.			T	T								T
Template Predicted Secondary structure																																						.	.	.	.	.																										.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.						.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	.	.	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I
Query Conservation																																																					.	.
Alig confidence											.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation											.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	I	G	I	E	L	N	E	.	.	.	P	A	R	P	Y	C	E	Q	L	K	A	A	G	L	L	C	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H	E	N	V	I	R	I	A	P	P	L	V	I	S	E	E	D	L	E	W	A	F	Q	K	I	K	A	V	L
Template Known Secondary structure		T							S	S	.	.	.		S											T						.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T								T	T
Template Predicted Secondary structure											.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		339	340	.	.	.	.	.	.	.				.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.														.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions