Job Description P09053 Confidence 99.94% Date Thu Jan 5 11:01:50 GMT 2012 Rank 152 Aligned Residues 323 % Identity 13% Template c3nysA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase wbpe; PDBTitle: x-ray structure of the k185a mutant of wbpe (wlbe) from pseudomonas2 aeruginosa in complex with plp at 1.45 angstrom resolution Resolution 1.45 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	.	A	G	R	R	A
Query Conservation																																																																												.
Alig confidence																				.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.																							.
Template Conservation																				.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		A	R	I	K	D	K	I	D	A	G	I	Q	R	V	L	R	H	G	.	.	.	.	.	.	.	Q	Y	I	L	G	P	E	V	T	E	L	E	D	R	L	A	D	F	V	.	.	.	.	.	.	.	.	G	A	K	Y	C	I	S	C	A	N	G	T	D	A	L	Q	I	V	Q	M	A	L	G	V	G	P	G	D
Template Known Secondary structure				T																.	.	.	.	.	.	.			S	S																.	.	.	.	.	.	.	.	T		S						S													T	T			T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.								30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.									.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L
Query Conservation
Alig confidence								.	.	.	.	.	.																							.	.	.	.																								.	.	.												.	.	.
Template Conservation								.	.	.	.	.	.																							.	.	.	.																								.	.	.												.	.	.
Template Sequence		E	V	I	T	P	G	.	.	.	.	.	.	F	T	Y	V	A	T	A	E	T	V	A	L	L	G	A	K	P	V	Y	V	D	I	.	.	.	.	D	P	R	T	Y	N	L	D	P	Q	L	L	E	A	A	I	T	P	R	T	K	A	I	.	.	.	I	P	V	S	L	Y	G	Q	C	A	D	.	.	.	F	D
Template Known Secondary structure							S	.	.	.	.	.	.	S	S		T									T	T								B	.	.	.	.		T	T	T		S	B		G	G	G	T	G	G	G			T	T					.	.	.			B		G	G	G					.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.																							.	.	.	.																								.	.	.												.	.	.
Template SS confidence
		77	.	.	80	.	.							.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.				.	140
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																															.	.																																												.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		A	I	N	A	I	A	S	K	Y	G	I	P	V	I	E	D	A	A	Q	S	F	G	A	S	Y	K	G	K	R	.	.	S	C	N	L	S	T	V	A	C	T	S	F	F	P	S	A	P	L	G	C	Y	G	D	G	G	A	I	F	T	N	D	D	E	L	A	T	A	I	R	Q	I	A	R	H	G	Q	D	R	R
Template Known Secondary structure										T	T			B					T	T	T	T	T				T	T			.	.	T	T	S	S	S	S								T	T	S	S	S			S	S								S												T	B	T	T				T
Template Predicted Secondary structure																															.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
						277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																			.	.	.	.																											.	.	.
Template Conservation																								.	.	.	.																											.	.	.
Template Sequence		Y	H	H	I	R	V	G	V	N	S	R	L	D	T	L	Q	A	A	I	L	L	P	.	.	.	.	K	L	E	I	F	E	E	E	I	A	L	R	Q	K	V	A	A	E	Y	D	L	S	L	K	Q	V	.	.	.	G	I	G	T	P	F	I	E	V	N	N	I	S	V	Y	A	Q	Y	T	V	R	M	D	N	R
Template Known Secondary structure		T				S				B														.	.	.	.				T																						T	.	.	.	T								T	T						S	S						T	T
Template Predicted Secondary structure																								.	.	.	.																											.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.				.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.												.	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.							.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.							.	.
Query Sequence		K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	.	.	.	.	.	.	.	.	.	.	.	C	M	R	M	N	Y	.	.	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.							.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation
Template Sequence		E	S	V	Q	A	S	L	K	A	A	G	V	P	T	A	V	H	Y	P	I	P	L	N	K	Q	P	A	V	A	D	E	K	A	K	L	P	V	G	D	K	A	A	T	Q	V	M	S	L	P	M	H	P	Y	L	D	T	A	S	I	K	I	I	C	A	A	L	T
Template Known Secondary structure												T				B		S		S	S		G	G	G	S	G	G	G			S	S	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions