Job Description P09053 Confidence 100.00% Date Thu Jan 5 11:01:50 GMT 2012 Rank 88 Aligned Residues 337 % Identity 13% Template c3nnkC_ PDB info PDB header:transferase Chain: C: PDB Molecule:ureidoglycine-glyoxylate aminotransferase; PDBTitle: biochemical and structural characterization of a ureidoglycine2 aminotransferase in the klebsiella pneumoniae uric acid catabolic3 pathway Resolution 2.58 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	R	T	P	G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G
Query Conservation
Alig confidence													.	.	.															.	.	.	.	.	.	.	.	.	.												.																				.
Template Conservation													.	.	.															.	.	.	.	.	.	.	.	.	.												.																				.
Template Sequence		Q	L	N	P	P	S	R	L	L	M	G	.	.	.	P	G	P	I	N	A	D	P	R	V	L	R	A	M	.	.	.	.	.	.	.	.	.	.	S	S	Q	L	I	G	Q	Y	D	P	A	.	M	T	H	Y	M	N	E	V	M	A	L	Y	R	G	V	F	R	T	E	.	N	R	W	T	M	L	V	D	G	T
Template Known Secondary structure		S										S	.	.	.	S	S													.	.	.	.	.	.	.	.	.	.	T	S					T	T				.																	T			.		S						S	S
Template Predicted Secondary structure													.	.	.															.	.	.	.	.	.	.	.	.	.												.																				.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.				.	20	.	.	.	.	.	.	.	.	.	30	.	.											.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.
Predicted Secondary structure																																								.	.																																			.
Query SS confidence																																								.	.																																			.
Query Sequence		S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	.	.	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	.	E	E	T	G	M
Query Conservation																																								.	.																																			.
Alig confidence																									.	.	.	.	.	.										.	.														.	.	.	.	.																	.
Template Conservation																									.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		S	R	A	G	I	E	A	I	L	V	S	A	I	R	P	G	D	K	V	L	V	P	V	.	.	.	.	.	.	F	G	R	F	G	H	L	L	C	E	I	A	R	R	C	R	A	E	V	H	T	I	E	V	.	.	.	.	.	P	W	G	E	V	F	T	P	D	Q	V	E	D	A	V	K	R	I	R	P	R	L
Template Known Secondary structure																T									.	.	.	.	.	.		S													T	T									.	.	.	.	.		T	T																		S
Template Predicted Secondary structure																									.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.						120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A
Query Conservation
Alig confidence																	.	.	.																																					.	.	.	.	.						.
Template Conservation																	.	.	.																																					.	.	.	.	.						.
Template Sequence		L	L	T	V	Q	G	D	T	S	T	T	M	L	Q	P	.	.	.	L	A	E	L	G	E	I	C	R	R	Y	D	A	L	F	Y	T	D	A	T	A	S	L	G	G	N	P	L	E	T	D	V	W	G	L	D	.	.	.	.	.	A	V	S	A	G	.	M	Q	C	L	G	G	P	S	G	T	S	P	I	T	L
Template Known Secondary structure						S			T	T	T	T					.	.	.		T	T								T	T								T	T	T	B	T	T	B				T	T	T	T	T		S	.	.	.	.	.						.								S	S
Template Predicted Secondary structure																	.	.	.																																					.	.	.	.	.						.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		263	.	.	.	.	.	.	270	.	.	.																																					.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	E	K	I	I	T	A	I	T	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.
Template Sequence		S	A	R	M	E	E	A	I	R	R	R	K	C	V	E	E	G	I	R	T	D	A	H	R	D	G	D	E	E	M	I	Y	S	N	Y	F	D	L	G	M	V	M	D	Y	W	G	P	E	R	L	N	H	H	T	E	A	T	T	A	L	F	G	A	R	E	C	A	.	.	.	.	.	.	R	L	I	L	Q	E	G
Template Known Secondary structure											T	T					T	T	S			T	T					S	S				S		S	T	T										S	T	T				S	S															.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280							.	.	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																				.	.	.																							.
Query SS confidence																																				.	.	.																							.
Query Sequence		K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	.	.	.	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	.	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H
Query Conservation																																				.	.	.																							.
Alig confidence																																				.	.	.								.															.											.	.	.	.	.	.	.	.	.
Template Conservation																																														.																										.	.	.	.	.	.	.	.	.
Template Sequence		L	D	Y	G	I	A	R	H	K	L	H	G	D	A	L	V	K	G	I	Q	A	M	G	L	E	T	F	G	D	L	K	H	K	M	N	N	V	L	G	V	V	I	P	Q	.	G	I	N	G	D	Q	A	R	K	L	M	L	E	D	F	G	I	E	I	G	T	S	F	G	P	.	.	.	.	.	.	.	.	.	L
Template Known Secondary structure																							T	T			B		S		G	G	G	B		T	T								S	.	S	S																		B				G	G	.	.	.	.	.	.	.	.	.	G
Template Predicted Secondary structure																																														.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.		.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.										.
		383	.	.	.	.	.	.	390				.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure										.	.	.
Query SS confidence										.	.	.
Query Sequence		T	H	Q	C	M	R	M	N	.	.	.	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R	A	W
Query Conservation										.	.	.
Alig confidence										.	.	.
Template Conservation
Template Sequence		H	G	K	V	W	R	I	G	T	M	G	Y	N	A	R	K	D	C	V	M	T	T	L	S	A	L	E	A	V	L	N	Y	L	K
Template Known Secondary structure		T	T	T								G	G	G		S																		T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions