Job Description P09053 Confidence 99.84% Date Thu Jan 5 11:01:50 GMT 2012 Rank 214 Aligned Residues 350 % Identity 13% Template c3n5mD_ PDB info PDB header:transferase Chain: D: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystals structure of a bacillus anthracis aminotransferase Resolution 2.05 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																									.	.	.
Template Conservation												.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																									.	.	.
Template Sequence		W	C	V	N	S	G	Y	G	R	K	.	.	.	.	.	.	.	.	E	L	A	E	A	A	Y	K	Q	L	Q	T	L	.	.	.	.	.	.	.	S	Y	F	P	X	S	Q	S	H	E	P	A	I	K	L	A	E	K	L	N	E	W	L	G	.	.	.	G	E	Y	V	I	F	F	S	N	S	G	S	E	A	N
Template Known Secondary structure			T		T	T		B				.	.	.	.	.	.	.	.											T	T		.	.	.	.	.	.	.	S				T	T	S																	T	.	.	.	S								S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.									.	.	.	.	70	.	.	.	.	.	.	.	.								.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		111	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	L	F	N	L	F	.	.	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation									.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	T	A	F	K	I	A	R	Q	Y	Y	A	Q	K	G	E	P	H	R	Y	K	F	X	S	R	Y	R	G	Y	H	G	N	T	X	A	T	X	A	A	T	G	Q	A	Q	R	R	Y	Q	Y	E	P	F	A	S	G	F	L	H	V	T	P	P	D	C	Y	R	X	P	G	I	E	R	E	N	I	Y	D	V	E	C
Template Known Secondary structure														T	T	T		T	T								T	T					S	S						S				G	G	G	T	T	T	T					S										T	T	T	S	T	T	T	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
							170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.	.	.	.	.																										.
Query SS confidence		.	.	.	.	.																										.
Query Sequence		.	.	.	.	.	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	.	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L
Query Conservation		.	.	.	.	.																										.
Alig confidence		.	.	.	.	.																										.
Template Conservation
Template Sequence		V	K	E	V	D	R	V	X	T	W	E	L	S	E	T	I	A	A	F	I	X	E	P	I	I	T	G	G	G	I	L	X	A	P	Q	D	Y	X	K	A	V	H	E	T	C	Q	K	H	G	A	L	L	I	S	D	E	V	I	C	G	F	G	R	T	G	K	A	F	G	F	X	N	Y	D	V	K	P	D	I	I
Template Known Secondary structure														G	G	G								S	S	B	T	T	T	T		B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T				S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.							.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure													.																				.	.	.	.	.	.
Query SS confidence													.																				.	.	.	.	.	.
Query Sequence		C	M	S	L	S	K	L	G	L	P	G	.	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	.	.	.	.	.	.	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E
Query Conservation													.																				.	.	.	.	.	.
Alig confidence		.	.										.																				.	.	.	.	.	.																						.	.	.	.	.
Template Conservation		.	.																																																									.	.	.	.	.
Template Sequence		.	.	T	X	A	K	G	I	T	S	A	Y	L	P	L	S	A	T	A	V	K	R	E	I	Y	E	A	F	K	G	K	G	E	Y	E	F	F	R	H	I	N	T	F	G	G	N	P	A	A	C	A	L	A	L	K	N	L	E	.	.	.	.	.	I	I	E	N	E	N	L	I	E	R	S	A	Q	X	G	S	L
Template Known Secondary structure		.	.				G	G	G	G	T	T	S	S													G	G	G		S	S	S	T	T		S						S	S	S	S														.	.	.	.	.					T	T
Template Predicted Secondary structure		.	.																																																									.	.	.	.	.
Template SS confidence
				278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.						.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.									.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.
Query Sequence		T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	.	.	.	.	.	.	.	.	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R
Query Conservation																																					.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.
Template Sequence		L	L	E	Q	L	K	E	E	I	G	E	H	P	L	V	G	D	I	R	G	K	G	L	L	V	G	I	E	L	V	N	D	K	E	T	K	E	P	I	D	N	D	K	I	A	S	V	V	N	A	C	K	E	K	G	L	I	I	G	R	N	G	X	T	.	.	.	.	.	.	.	T	A	G	Y	N	N	I	L	T
Template Known Secondary structure											T	T	S	T	T							S	S	S										T	T	T	T																		T	T							T	T	S	.	.	.	.	.	.	.	S	T	T
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.								.	.	.	.	.	420	.	.	.
		389	390			.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		M	N	.	.	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R	A
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		L	A	P	P	L	V	I	S	S	E	E	I	A	F	V	I	G	T	L	K	T	A	X	E	R	I
Template Known Secondary structure						T	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions