Job Description P09053 Confidence 99.97% Date Thu Jan 5 11:01:50 GMT 2012 Rank 99 Aligned Residues 333 % Identity 17% Template c3mafB_ PDB info PDB header:lyase Chain: B: PDB Molecule:sphingosine-1-phosphate lyase; PDBTitle: crystal structure of stspl (asymmetric form) Resolution 2.97 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.																			.	.	.	.	.
Query SS confidence																																																									.	.																			.	.	.	.	.
Query Sequence		M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	.	.	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	.	.	.	.	.
Query Conservation																																																									.	.																			.	.	.	.	.
Alig confidence																				.	.	.	.	.																																	.	.																			.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		H	I	A	F	L	N	E	V	Y	A	L	Q	S	Q	S	N	P	L	.	.	.	.	.	H	P	D	L	W	P	S	T	A	K	F	E	A	E	V	V	A	M	T	A	H	M	L	G	G	D	A	A	G	G	T	V	C	G	T	V	T	S	G	G	T	E	S	L	L	L	A	M	K	T	Y	R	D	W	A	R	A
Template Known Secondary structure														T	T			T	T	.	.	.	.	.		T	T	T																			T	T	T	T	T	T	T	S								S	S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
					119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V
Query Conservation		.	.	.
Alig confidence		.	.	.											.	.	.	.	.	.																							.	.	.	.	.
Template Conservation															.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		T	K	G	I	T	A	P	E	A	V	V	P	V	.	.	.	.	.	.	S	A	H	A	A	F	D	K	A	A	Q	Y	F	G	I	K	L	V	R	T	P	L	.	.	.	.	.	D	A	D	Y	R	A	D	V	A	A	M	R	E	A	I	T	P	N	T	V	V	V	A	G	S	A	P	G	Y	P	H	G	V	V
Template Known Secondary structure						S	S							T	.	.	.	.	.	.	T	S		T										T								B	.	.	.	.	.		T	T	S	S	B											T	T								T	T		T	T	T
Template Predicted Secondary structure															.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.							.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.
Query Sequence		I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	.	.	.	.	.	.	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A
Query Conservation																																.	.	.	.	.	.
Alig confidence				.	.	.																										.	.	.	.	.	.
Template Conservation				.	.	.
Template Sequence		D	P	.	.	.	I	P	E	I	A	A	L	A	A	E	H	G	I	G	C	H	V	D	A	C	L	G	G	F	I	L	P	W	A	E	R	L	G	Y	P	V	P	P	F	D	F	R	L	E	G	V	T	S	V	S	A	D	T	H	K	Y	G	Y	G	A	K	G	T	S	V	I	L	Y	R	R	P	D	L	L	H
Template Known Secondary structure				.	.	.												T								T	T	T	T	T	T						T	T	T							S	T	T	S	T	T								T	T	T	T	T				S	S							S	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		255	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		270	.	.	.	.	.										.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		I	T	N	M	N	G	.	.	.	.	.	.	.	.	.	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		Y	Q	Y	F	I	A	A	D	W	P	G	G	L	Y	F	S	P	T	F	A	G	S	R	P	G	A	L	S	A	T	A	W	A	A	M	L	S	L	G	E	E	G	Y	L	D	A	T	R	R	I	L	Q	A	A	D	R	L	K	A	G	V	R	A	I	.	.	.	P	S	L	K	I	L	G	D	P	L	W	V	I
Template Known Secondary structure								S	S		T	T						S	S	S		S	S																																									T	S	.	.	.	T	T				S	S			S	S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.				.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	.	.	.	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R	A	W	A	E
Query Conservation																																																						.	.	.
Alig confidence				.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation				.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	.	.	.	A	S	D	E	L	N	I	Y	Q	V	M	E	E	M	A	G	R	G	W	R	L	N	G	L	H	.	.	.	.	.	.	.	.	.	.	.	.	R	P	P	A	F	H	V	A	L	T	L	R	H	T	E	P	G	V	V	D	R	F	L	A	D	L	Q	D	A	V	A	Q	V	R	A	H
Template Known Secondary structure				.	.	.			S	S	S												T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T								G	G	G	S	S	T	T																		T
Template Predicted Secondary structure				.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		409	410				.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.													.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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