Job Description P09053 Confidence 99.97% Date Thu Jan 5 11:01:50 GMT 2012 Rank 90 Aligned Residues 332 % Identity 13% Template c3islA_ PDB info PDB header:transferase Chain: A: PDB Molecule:purine catabolism protein pucg; PDBTitle: crystal structure of ureidoglycine-glyoxylate aminotransferase (pucg)2 from bacillus subtilis Resolution 2.06 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.																															.
Template Sequence		P	G	P	V	E	V	D	P	R	V	L	R	V	M	.	.	.	.	.	.	.	.	.	.	.	S	T	P	V	V	G	Q	F	D	P	A	F	T	G	I	M	N	E	T	M	E	M	L	R	E	L	F	Q	T	K	.	N	R	W	A	Y	P	I	D	G	T	S	R	A	G	I	E	A	V	L	A	S	V	I	E
Template Known Secondary structure		S	S	S											T	.	.	.	.	.	.	.	.	.	.	.	T	S					T	T	S																		T	T			.		S							S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.												.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																								.	.																																				.
Query SS confidence																								.	.																																				.
Query Sequence		R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	.	.	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	.	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I
Query Conservation																								.	.																																				.
Alig confidence											.	.	.	.	.	.								.	.																.	.	.	.	.																.
Template Conservation											.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		P	E	D	D	V	L	I	P	I	.	.	.	.	.	.	Y	G	R	F	G	Y	L	L	T	E	I	A	E	R	Y	G	A	N	V	H	M	L	E	C	.	.	.	.	.	E	W	G	T	V	F	D	P	E	D	I	I	R	E	I	K	K	V	K	P	K	I	V	A	M	V	H	G	E	T	S	T	G	R	I	H
Template Known Secondary structure		T	T								.	.	.	.	.	.	S	S													T	T									.	.	.	.	.		T	T																		S						S			T	T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.							.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.						120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence			.	.	.																																					.	.	.	.	.																																	.	.	.
Template Conservation			.	.	.																																					.	.	.	.	.
Template Sequence		P	.	.	.	L	K	A	I	G	E	A	C	R	T	E	D	A	L	F	I	V	D	A	V	A	T	I	G	G	C	E	V	K	V	D	E	W	K	I	D	.	.	.	.	.	A	A	I	G	G	T	Q	K	C	L	S	V	P	S	G	M	A	P	I	T	Y	N	E	R	V	A	D	V	I	A	A	R	N	R	P
Template Known Secondary structure			.	.	.											T	T								T	T	T	T	T	T	S				T	T	T	T	T		S	.	.	.	.	.						S	S	S	T	T				S	S																T
Template Predicted Secondary structure			.	.	.																																					.	.	.	.	.
Template SS confidence
		156				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
																			274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																													.
Template Conservation																																								.	.																													.
Template Sequence		I	T	S	N	Y	F	D	L	S	Q	L	E	D	Y	W	S	E	R	R	L	N	H	H	T	E	A	T	T	M	L	Y	A	L	R	E	G	V	R	.	.	L	V	L	E	E	G	L	E	T	R	F	E	R	H	R	H	H	E	A	A	L	A	A	G	I	K	A	M	.	G	L	R	L	F	G	D	D	S	C	K
Template Known Secondary structure			S		S	T	T									T	S	T	T				S	S																.	.																												T	.	T			B		S		G	G	G	B
Template Predicted Secondary structure																																								.	.																													.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360		.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390				.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																										.																															.	.	.
Query SS confidence																										.																															.	.	.
Query Sequence		G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	.	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	.	.	.	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R	A
Query Conservation																										.																															.	.	.
Alig confidence													.													.													.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation													.																										.	.	.	.	.	.	.	.	.
Template Sequence		M	P	V	V	T	C	V	E	I	P	G	.	G	I	D	G	E	S	V	R	D	M	L	L	A	Q	F	G	I	E	I	A	S	S	F	G	P	.	.	.	.	.	.	.	.	.	L	A	G	K	I	W	R	I	G	T	M	G	Y	S	C	R	K	E	N	V	L	F	V	L	A	G	L	E	A	V	L	L	R	H
Template Known Secondary structure			T	T								T	.	T																			B				S	T	.	.	.	.	.	.	.	.	.	T	T	T	T								G	G	G		S																		T
Template Predicted Secondary structure													.																										.	.	.	.	.	.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.										.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		413	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	G
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		393	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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