Job Description P09053 Confidence 100.00% Date Thu Jan 5 11:01:50 GMT 2012 Rank 1 Aligned Residues 412 % Identity 43% Template c3if2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:aminotransferase; PDBTitle: crystal structure of putative amino-acid aminotransferase2 (yp_265399.1) from psychrobacter arcticum 273-4 at 2.50 a resolution Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.
Predicted Secondary structure																														.																																							.	.	.	.	.	.	.
Query SS confidence																														.																																							.	.	.	.	.	.	.
Query Sequence		T	F	S	L	F	G	D	K	F	T	R	H	S	G	I	T	L	L	M	E	D	L	N	D	G	L	R	T	.	P	G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	.	.	.	.	.	.	.	C	N	Y	D	G	P
Query Conservation																														.																																							.	.	.	.	.	.	.
Alig confidence																														.																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	S	K	F	G	Q	K	F	T	Q	P	T	G	I	S	Q	L	X	D	D	L	G	D	A	L	K	S	D	Q	P	V	N	X	L	G	G	G	N	P	A	K	I	D	A	V	N	E	L	F	L	E	T	Y	K	A	L	G	N	D	N	D	T	G	K	A	N	S	S	A	I	I	S	X	A	N	Y	S	N	P
Template Known Secondary structure												S																T	S	S	S						S																									S		T	T		S										S				T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	.	.	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V
Query Conservation																																																	.	.
Alig confidence																																																	.	.
Template Conservation
Template Sequence		Q	G	D	S	A	F	I	D	A	L	V	G	F	F	N	R	H	Y	D	W	N	L	T	S	E	N	I	A	L	T	N	G	S	Q	N	A	F	F	Y	L	F	N	L	F	G	G	A	F	V	N	E	K	S	V	D	K	S	I	L	L	P	L	T	P	E	Y	I	G	Y	S	D	V	H	V	E	G	Q	H	F	A
Template Known Secondary structure		T																							G	G	G					S	S													S																S	S	S	S			G	G	G	T	T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		152	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure															.	.	.	.	.	.														.	.	.
Query SS confidence															.	.	.	.	.	.														.	.	.
Query Sequence		S	A	R	P	N	I	E	L	L	P	E	G	Q	.	.	.	.	.	.	F	K	Y	H	V	D	F	E	H	L	H	I	G	.	.	.	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G
Query Conservation															.	.	.	.	.	.														.	.	.
Alig confidence															.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		A	V	L	P	H	I	D	E	V	T	H	D	G	E	E	G	F	F	K	Y	R	V	D	F	E	A	L	E	N	L	P	A	L	K	E	G	R	I	G	A	I	C	C	S	R	P	T	N	P	T	G	N	V	L	T	D	E	E	X	A	H	L	A	E	I	A	K	R	Y	D	I	P	L	I	I	D	N	A	Y	G
Template Known Secondary structure													T	T																T						T	T									S	S		T	T	T																			T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	P	F	P	N	I	I	Y	S	D	A	H	L	N	W	D	N	N	T	I	L	C	F	S	L	S	K	I	G	L	P	G	X	R	T	G	I	I	V	A	D	A	K	V	I	E	A	V	S	A	X	N	A	V	V	N	L	A	P	T	R	F	G	A	A	I	A	T	P	L	V	A	N	D	R	I	K	Q	L	S
Template Known Secondary structure		T	T	T	T			B		S								T	T							S	G	G	G	T		G	G	G																							T	S	S															T	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		D	N	E	I	K	P	F	Y	Q	K	Q	A	T	L	A	V	K	L	L	K	Q	A	L	G	D	Y	P	L	X	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	S	T	L	D	L	Y	E	R	L	K	A	K	G	T	L	I	V	P	S	E	Y	F	F	P	G	V	D	V	S	D	Y	Q
Template Known Secondary structure				T																				S	S	S	S	S								B	S	S							T	T		S	S												T	T						G	G	G	S		T	T	S			T	T		G
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	H	Q	C	M	R	M	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	A	H	E	C	I	R	X	S	I	A	A	D	E	Q	T	L	I	D	G	I	K	V	I	G	E	V	V	R	E	L	Y
Template Known Secondary structure		G	G	G	S						S		S
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440