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Job DescriptionP09053
Confidence99.88%DateThu Jan 5 11:01:50 GMT 2012
Rank202Aligned Residues325
% Identity13%Templatec3hl2D_
PDB info PDB header:transferaseChain: D: PDB Molecule:o-phosphoseryl-trna(sec) selenium transferase; PDBTitle: the crystal structure of the human sepsecs-trnasec complex
Resolution2.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  ELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNI
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Template Sequence  KITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPK. . . AKYIIWPRIDQKSCFKSMITAGFEPVVIENV
Template Known Secondary structure  T
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   116...120.........130.........140.........150.........160. ........170.........180.........190..
 
   158.160.........170...... ...180.........190.........200.........210.........220......... 230..
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Query Sequence  ELLPEGQFKYHVDFEHLHI. . . . GEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGII. FSE
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Template Sequence  LE. . GDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP. . . DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQ
Template Known Secondary structure  ..TT


GGGSS

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   193. .....200.........210.........220.........230.. .......240.........250.........260.......
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
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Query Sequence  ARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQ
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Template Sequence  QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSY
Template Known Secondary structure  S


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   268.270.........280.........290.........300.........310.........320.........330.........340.......
 
   313......320.........330.........340..... ....350.........360.... .....370.......
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Query Sequence  RVQETIAIIRRYLPENRCLIHKPEGAIFLWLWF. . . . KDLPITTKQLYQRLKARGV. . . . . . . . . . . LMVPGHNFFPGLD
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Template Sequence  LSNQIKKLSEAY. . . NERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMS
Template Known Secondary structure  T...T

B


TT
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TT

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   348.350......... 360.........370.........380.........390.........400.........410.........420....
 
   378.380.........390.. .......400.........410...
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Query Sequence  KPWPHTHQCMRMNYV. . PEPEKIEAGVKILAEEIERAW
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Template Sequence  HTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVR
Template Known Secondary structure  TSS

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   425....430.........440.........450.........460..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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