Job Description P09053 Confidence 100.00% Date Thu Jan 5 11:01:50 GMT 2012 Rank 77 Aligned Residues 328 % Identity 20% Template c3hdoB_ PDB info PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: crystal structure of a histidinol-phosphate aminotransferase from2 geobacter metallireducens Resolution 1.61 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	T	P	G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S
Query Conservation
Alig confidence																						.	.															.	.										.														.	.	.	.	.	.
Template Conservation																						.	.															.	.										.														.	.	.	.	.	.
Template Sequence		P	D	I	A	S	W	I	K	L	N	T	N	E	N	P	Y	P	P	S	P	.	.	E	V	V	K	A	I	L	E	E	L	G	P	D	G	.	.	A	A	L	R	I	Y	P	S	A	.	S	S	Q	K	L	R	E	V	A	G	E	L	Y	.	.	.	.	.	.	G	F	D	P	S	W	I	I	X	A	N	G	S
Template Known Secondary structure		S			T	T	S				S	S				S	S					.	.											T	T	T		.	.	G	G	G	G	S				S	.	S													.	.	.	.	.	.	T			G	G	G					S	S
Template Predicted Secondary structure																						.	.															.	.										.														.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S
Query Conservation
Alig confidence																			.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template Sequence		D	E	V	L	N	N	L	I	R	A	F	A	A	E	G	E	E	.	.	.	.	.	.	I	G	Y	V	H	P	S	Y	S	Y	Y	G	T	L	A	E	V	Q	G	A	R	V	R	T	F	G	L	T	G	D	F	R	I	A	G	.	.	.	.	.	.	.	.	.	F	P	E	R	Y	E	G	K	V	F	F	L	T
Template Known Secondary structure															T	T			.	.	.	.	.	.					S	S	S		T										T								B		T	T	S		B	T	T	.	.	.	.	.	.	.	.	.			S	S	B			S
Template Predicted Secondary structure																			.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.										.	.	.	.	.	.	.	.	150	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	.	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K
Query Conservation																																																																	.
Alig confidence													.	.	.																												.	.																					.
Template Conservation													.	.	.																												.	.
Template Sequence		T	P	N	A	P	L	G	P	S	F	P	.	.	.	L	E	Y	I	D	E	L	A	R	R	C	A	G	X	L	V	L	D	E	T	Y	A	E	F	A	E	S	.	.	N	A	L	E	L	V	R	R	H	E	N	V	V	V	T	R	T	L	S	K	S	Y	S	L	A	G	X	R	I	G	L	A	I	A	R	P	E
Template Known Secondary structure		S	S		T	T	T						.	.	.											B	S	S							T	T	G	G	G	S	S		.	.			T							S	S							S	T	T	T	T	S		T	T	S
Template Predicted Secondary structure													.	.	.																												.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.				.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F
Query Conservation
Alig confidence																													.	.	.	.	.	.																										.	.	.	.							.
Template Conservation																													.	.	.	.	.	.																										.	.	.	.							.
Template Sequence		V	I	A	A	L	D	K	I	R	D	H	Y	N	L	D	R	L	A	Q	A	A	C	V	A	A	L	R	.	.	.	.	.	.	D	Q	A	Y	L	S	E	C	C	R	R	I	R	E	T	R	E	W	F	T	T	E	L	R	S	.	.	.	.	I	G	Y	D	V	I	.	P	S	Q	G	N	Y	L	F	A	T	P
Template Known Secondary structure										S		S			S														.	.	.	.	.	.																										.	.	.	.	T	T					.			S	S	S
Template Predicted Secondary structure																													.	.	.	.	.	.																										.	.	.	.							.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.					.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E
Query Conservation
Alig confidence			.	.																									.	.	.	.	.	.	.	.	.												.
Template Conservation			.	.																									.	.	.	.	.	.	.	.	.												.
Template Sequence		P	.	.	D	R	D	G	K	R	V	Y	D	G	L	Y	A	R	K	V	L	V	R	H	F	S	D	P	.	.	.	.	.	.	.	.	.	L	L	A	H	G	X	R	I	S	I	G	.	T	R	E	E	X	E	Q	T	L	A	A	L	K	E	I
Template Known Secondary structure		T	.	.	T													T	T				B				S	T	.	.	.	.	.	.	.	.	.	T	T	T	T	S							.
Template Predicted Secondary structure			.	.																									.	.	.	.	.	.	.	.	.												.
Template SS confidence
		299			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.										.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions