Job Description P09053 Confidence 99.67% Date Thu Jan 5 11:01:50 GMT 2012 Rank 232 Aligned Residues 283 % Identity 14% Template c3fd0B_ PDB info PDB header:lyase Chain: B: PDB Molecule:putative cystathionine beta-lyase involved in aluminum PDBTitle: crystal structure of putative cystathionine beta-lyase involved in2 aluminum resistance (np_470671.1) from listeria innocua at 2.12 a3 resolution Resolution 2.12 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																								.																																	.	.	.
Query SS confidence																								.																																	.	.	.
Query Sequence		F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	.	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	.	.	.	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R
Query Conservation																								.																																	.	.	.
Alig confidence																								.																	.	.	.	.	.	.	.	.									.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.
Template Sequence		V	L	D	A	F	Q	E	N	K	V	S	D	F	H	F	N	P	S	T	G	Y	G	Y	D	D	E	G	R	D	T	L	E	R	V	Y	A	S	V	F	.	.	.	.	.	.	.	.	K	T	E	A	A	L	V	R	P	Q	I	I	S	G	T	H	A	I	S	T	V	L	F	G	I	L	R	P	G	D	E	L	L
Template Known Secondary structure									T	T			G	G	G	G					T	T		T	T																.	.	.	.	.	.	.	.	T		S						T	T	S		S															T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.									.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.											.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Query Sequence		V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	.	.	.	.	.	.	.	.	.	.	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	.	.	.	.	T	N	P
Query Conservation																					.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Alig confidence						.	.	.	.	.											.	.	.	.	.	.	.	.	.	.													.	.	.	.	.																												.	.	.	.
Template Conservation						.	.	.	.	.																																	.	.	.	.	.
Template Sequence		Y	I	T	G	.	.	.	.	.	E	P	Y	D	T	L	E	E	I	V	G	I	R	S	E	G	Q	G	S	L	K	D	F	Q	I	G	Y	D	A	V	P	L	.	.	.	.	.	L	P	N	G	E	I	D	Y	P	A	V	S	K	K	I	S	A	N	T	K	X	I	G	I	Q	R	S	R	G	Y	A	D	R	P
Template Known Secondary structure				S	S	.	.	.	.	.	S			T	T						T	S	S		S	S	S			T	G	G	G	T									.	.	.	.	.		T	T	S	S												T	T									S		T	T	S	S	S
Template Predicted Secondary structure						.	.	.	.	.																																	.	.	.	.	.
Template SS confidence
		105	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.																																											.	.
Query SS confidence																							.	.																																											.	.
Query Sequence		T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	.	.	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	.	.	S	R	C	G	I	I	I	A	N	E	K	I	I
Query Conservation																							.	.																																											.	.
Alig confidence								.	.	.													.	.																									.	.	.	.	.									.					.	.
Template Conservation								.	.	.																																							.	.	.	.	.									.
Template Sequence		S	F	T	I	E	K	.	.	.	I	K	E	X	V	T	F	V	K	N	I	N	P	N	I	I	V	F	V	D	N	C	Y	G	E	F	V	E	R	I	E	P	T	E	V	G	A	D	.	.	.	.	.	I	I	A	G	S	L	I	N	.	P	G	G	G	L	A	K	T	G	G	Y	I	A	G	R	N	T	L	V
Template Known Secondary structure								.	.	.													T	T	S							T	T	T	T	T	T	S	S			G	G	G	T	T		S	.	.	.	.	.									.	T	T	T	T	T			S
Template Predicted Secondary structure								.	.	.																																							.	.	.	.	.									.
Template SS confidence
		175	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D
Query Conservation
Alig confidence																																						.	.	.
Template Conservation																																						.	.	.
Template Sequence		D	L	C	G	Y	R	L	T	T	P	G	I	G	R	E	A	G	A	S	L	Y	S	L	L	E	X	Y	Q	G	F	F	L	A	P	H	V	.	.	.	T	A	Q	A	I	K	G	A	R	F	T	A	A	X	L	A	E	F	G	V	E	A	D	P	L	W	D	A	K	R	T	D	L	I	Q	S	V	S	F	H	S
Template Known Secondary structure									S		T	T	T	G	G	G					T	T																.	.	.																		T	T					S		T	T	S			S	S	S							S
Template Predicted Secondary structure																																						.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	K	D	K	X	I	A	F	A	Q	A	I	Q	A	A	S
Template Known Secondary structure		.														T	S
Template Predicted Secondary structure		.
Template SS confidence
			324	.	.	.	.	.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions