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Job DescriptionP09053
Confidence99.95%DateThu Jan 5 11:01:50 GMT 2012
Rank142Aligned Residues363
% Identity13%Templatec3f9tB_
PDB info PDB header:lyaseChain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
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Query Sequence  GITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWD
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Template Sequence  SEKEILEELKKYRSLDLKYEDGNIFGSXCSNVLPITRKIVDIFLETNLG. . . . . DPGLFKGTKLLEEKAVALLGSLLN. .
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TTS

GGGS
B
S
S




TTT

TT.....SGGG
TT..
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   10.........20.........30.........40.........50........ .60.........70.........80..
 
   95....100.........110......... 120.........130.........140.........150.........160.......
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Query Sequence  IEPQNIALTNGSQSAFFYLFNLFAG. . . . . . . RRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKY
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Template Sequence  NKDAYGHIVSGGTEANLXALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREXXDLEYIYAPI. . . . . KEDYTI
Template Known Secondary structure 
TT
S
TT



SS
TT

TT

B.....
TTSSB
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   83......90.........100.........110.........120.........130.........140.........150. ......
 
   168.170.........180..... ....190.........200.........210.........220.........230.........240
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Query Sequence  HVDFEHLHIGEETGMICV. SRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPN. . . . . .
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Template Sequence  DEKFVKDAVEDYDVDGIIGIAGTTELGTIDN. . . IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL
Template Known Secondary structure 
S


BS
TTT

B

...T

TTGGGTGGG

GGG

TT




SGGG
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   158.160.........170.........180........ .190.........200.........210.........220.........230....
 
   241........250.........260.........270..... ....280.........290.........300.........310.....
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Query Sequence  . . IVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNG. . . IISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQ
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Template Sequence  GVDSITIDPHKXGHCPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECX
Template Known Secondary structure  T
S

TTTTT


SS
SSGGGGGGT

TTSSSS
SS
SS

S
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   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   316...320.........330.........340.........350.........360.........370.........380.........390.. .
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Query Sequence  ETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYV. . P
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Template Sequence  ENTLYLYKKLKENNFKPVIEPILNIVAIEDED. . . . YKEVCKKLRDRGIYVSVCN. . . . . . . . . . . . CVKALRIVVXPHI
Template Known Secondary structure  TT

BSS

SSS
TT....TT
B

S............SSS

TT
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   315....320.........330.........340...... ...350.........360..... ....370........
 
   394.....400........
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Query Sequence  EPEKIEAGVKILAEE
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Template Sequence  KREHIDNFIEILNSI
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   379380.........390...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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