Job Description P09053 Confidence 99.90% Date Thu Jan 5 11:01:50 GMT 2012 Rank 193 Aligned Residues 326 % Identity 11% Template c3e77A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: human phosphoserine aminotransferase in complex with plp Resolution 2.50 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.							.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.		.	.	.	.	110	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.																								.								.
Query SS confidence																																				.	.	.	.	.	.																								.								.
Query Sequence		Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	.	.	.	.	.	.	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	.	N	I	A	L	T	N	G	.	S	Q	S	A	F	F	Y	L
Query Conservation																																				.	.	.	.	.	.																								.								.
Alig confidence																																	.			.	.	.	.	.	.													.	.	.	.	.	.						.								.
Template Conservation																																	.																					.	.	.	.	.	.
Template Sequence		Q	S	M	L	P	H	S	V	L	L	E	I	Q	K	E	L	L	D	Y	K	G	V	G	I	S	V	L	E	M	S	H	.	R	S	S	D	F	A	K	I	I	N	N	T	E	N	L	V	R	E	L	L	.	.	.	.	.	.	A	V	P	D	N	Y	K	V	I	F	L	Q	G	G	G	C	G	Q	F	S	A	V
Template Known Secondary structure		S														T	S	S	S	G	G	G	S	S	S		T	T	T			T	.	T	S																			.	.	.	.	.	.	T			T	T							S	S
Template Predicted Secondary structure																																	.																					.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.							.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		114	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		F	N	L	F	A	G	.	.	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P
Query Conservation								.	.
Alig confidence								.	.											.	.	.	.	.	.																					.	.	.
Template Conservation																				.	.	.	.	.	.																					.	.	.
Template Sequence		P	L	N	L	I	G	L	K	A	G	R	C	A	D	Y	V	V	T	.	.	.	.	.	.	G	A	W	S	A	K	A	A	E	E	A	K	K	F	G	T	I	N	I	V	.	.	.	H	P	K	L	G	S	Y	T	K	I	P	D	P	S	T	W	N	L	N	P	D	A	S	Y	V	Y	Y	C	A	N	E	T	V
Template Known Secondary structure						G	G	G	S	T	T									.	.	.	.	.	.	S											T	T	T	S						.	.	.	S				S	S	S		S				G	G	G					T	T		S						S			T	T
Template Predicted Secondary structure																				.	.	.	.	.	.																					.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.							.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	.
Query Conservation																																																																																	.
Alig confidence								.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.														.																.
Template Conservation								.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.														.
Template Sequence		H	G	V	E	F	D	.	.	.	.	.	.	.	.	F	I	P	D	V	K	G	A	V	L	V	C	D	M	S	S	N	F	L	S	K	P	V	D	V	S	K	F	G	.	.	.	.	.	.	.	V	I	F	A	G	A	Q	K	N	V	G	S	A	.	G	V	T	V	V	I	V	R	D	D	L	L	G	F	A	L
Template Known Secondary structure		T	T				S	.	.	.	.	.	.	.	.	S					T	T								T	T	T	T	T	S	S				G	G	G		S	.	.	.	.	.	.	.						G	G	G	T	T	S		T	.	T								T	T	S		S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.														.
Template SS confidence
		158	.	160	.	.	.									.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
										271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																	.	.																																			.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																	.	.																																			.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	.	.	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.																																	.	.																																			.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																	.	.																							.	.	.										.	.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		R	E	C	P	S	V	L	E	Y	K	V	Q	A	G	N	S	S	L	Y	N	T	P	P	C	F	S	I	Y	V	M	G	L	V	L	E	W	I	K	N	N	G	G	A	A	A	M	E	K	L	S	S	I	K	S	Q	T	I	Y	E	I	I	D	N	S	.	.	.	Q	G	F	Y	V	C	P	V	E	P	Q	N	R
Template Known Secondary structure		T	T	S		G	G	G							T	T	T	T		S	S																				T	T																						T	S	.	.	.	T	T	S					S		G	G	G	B
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.				.	.	.	.	290	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.				.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																		.	.	.																																								.	.
Query SS confidence																		.	.	.																																								.	.
Query Sequence		G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	.	.	.	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	.	.	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R
Query Conservation																		.	.	.																																								.	.
Alig confidence																		.	.	.																			.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	M	N	I	P	F	R	I	G	N	A	K	G	D	D	A	L	E	K	R	F	L	D	K	A	L	E	L	N	M	L	S	L	K	G	H	.	.	.	.	.	.	.	.	.	.	.	R	S	V	G	G	I	R	A	S	L	Y	N	A	V	T	I	E	D	V	Q	K	L	A	A	F	M	K	K	F	L	E	M
Template Known Secondary structure			S	S							S	S	T	T																T	T			S		B			.	.	.	.	.	.	.	.	.	.	.	T	T	T		S							T	T	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.												.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		412	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		368	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions