Job Description P09053 Confidence 99.93% Date Thu Jan 5 11:01:50 GMT 2012 Rank 161 Aligned Residues 361 % Identity 11% Template c3bcxA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cdp-6-deoxy-l-threo-d-glycero-4-hexulose-3- PDBTitle: e1 dehydrase Resolution 2.40 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		I	T	L	L	M	E	D	L	N	D	G	L	R	T	P	G	A	I	M	L	G	G	G	N	.	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D
Query Conservation																										.
Alig confidence																										.																							.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		I	A	E	L	V	A	Q	Y	A	E	T	A	M	A	P	K	P	F	E	A	G	K	S	V	V	P	P	S	G	K	V	I	G	T	K	E	L	Q	L	M	V	E	A	S	L	D	G	.	.	.	.	.	.	.	W	L	T	T	G	R	F	N	D	A	F	E	K	K	L	G	E	Y	L	.	.	.	.	.	.	.
Template Known Secondary structure														T							T	T	T	S		B		S																				T	.	.	.	.	.	.	.			B	S																.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.								.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.
Query Sequence		I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	.	.	.	.	.	.	.	.	.	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F
Query Conservation																										.	.	.	.	.	.	.	.	.
Alig confidence		.																								.	.	.	.	.	.	.	.	.						.	.	.	.	.	.																												.	.	.	.
Template Conservation		.																																						.	.	.	.	.	.																												.	.	.	.
Template Sequence		.	G	V	P	Y	V	L	T	T	T	S	G	S	S	A	N	L	L	A	L	T	A	L	T	S	P	K	L	G	V	R	A	L	K	P	G	D	E	.	.	.	.	.	.	V	I	T	V	A	A	G	F	P	T	T	V	N	P	T	I	Q	N	G	L	I	P	V	F	V	D	V	.	.	.	.	D	I	P	T	Y
Template Known Secondary structure		.	T		S						S													T	T		G	G	G	G	G	G	S			T	T			.	.	.	.	.	.					S	S	S											T	T								B	.	.	.	.		T	T	T
Template Predicted Secondary structure		.																																						.	.	.	.	.	.																												.	.	.	.
Template SS confidence
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.							.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M
Query Conservation
Alig confidence																					.	.	.											.	.	.																																					.	.
Template Conservation																					.	.	.											.	.	.																																					.	.
Template Sequence		N	V	N	A	S	L	I	E	A	A	V	S	D	K	T	K	A	I	M	.	.	.	I	A	H	T	L	G	N	L	F	D	.	.	.	L	A	E	V	R	R	V	A	D	K	Y	N	L	W	L	I	E	D	C	C	D	A	L	G	S	T	Y	D	G	K	M	A	G	T	F	G	.	.	D	I	G	T	V	S	F
Template Known Secondary structure		S	B		G	G	G							S	S						.	.	.				G	G	G					.	.	.												T								T	T		T	T				T	T			T	T	S	S	S	.	.	S
Template Predicted Secondary structure																					.	.	.											.	.	.																																					.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.																						.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	A	H	H	I	T	M	G	E	G	G	A	V	F	T	Q	S	A	E	L	K	S	I	I	E	S	F	R	D	W	G	R	D	C	Y	C	L	G	S	L	P	F	G	Y	D	H	K	Y	T	Y	S	H	L	G	Y	N	L	K	I	T	D	M	Q	A	A	C	G	L	A	Q	L	E	R	I	E	E	F	V	E
Template Known Secondary structure		S	T	T	S	S	S			S	S							S													B	T	T	B										T	T			G	G	G		B		S				B				B
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	K	A	N	F	K	Y	L	K	D	A	L	Q	S	C	A	D	F	I	E	L	P	E	A	T	E	N	S	D	P	S	W	F	G	F	P	I	T	L	K	E	D	S	G	V	S	R	I	D	L	V	K	F	L	D	E	A	K	V	G	T	R	L	L	F	A	G	N	L	T	R	Q	P	Y	F	H	D	V	K
Template Known Secondary structure														G	G	G	G	T	T	T								T	T						S	S							G	G	G	S	S												T	T	B			B			T	T	S	S	G	G	G	S	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		385	.																.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Query Sequence		Q	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	M	N	Y	V	P	.	.	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.
Template Conservation
Template Sequence		Y	R	V	V	G	E	L	T	N	T	D	R	I	M	N	Q	T	F	W	I	G	I	Y	P	G	L	T	H	D	H	L	D	Y	V	V	S	K	F	E	E	F	F
Template Known Secondary structure						S																		S	T	T																	T
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.