Job Description P09053 Confidence 99.94% Date Thu Jan 5 11:01:50 GMT 2012 Rank 143 Aligned Residues 343 % Identity 15% Template c2zsmA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form Resolution 2.30 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.														.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.														.	.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		G	P	L	I	L	G	H	K	H	P	.	.	.	.	.	.	.	.	R	V	L	E	A	V	E	E	A	L	A	R	G	.	.	.	.	.	W	L	Y	G	A	P	G	E	A	E	V	L	L	A	E	K	I	L	G	Y	V	.	.	.	.	.	.	.	K	R	G	G	M	I	R	F	V	N	S	G	T	E	A	T
Template Known Secondary structure		T	T		T	T		B	S			.	.	.	.	.	.	.	.											T	T		.	.	.	.	.	S			S	S			S														.	.	.	.	.	.	.		T	T							S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.														.	.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.									.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.
Predicted Secondary structure																																																											.	.	.											.	.	.
Query SS confidence																																																											.	.	.											.	.	.
Query Sequence		F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	.	.	.	H	V	D	F	E	H	L	H	I	G	.	.	.	E	E	T	G	M	I	C
Query Conservation																																																											.	.	.											.	.	.
Alig confidence															.	.	.																																										.	.	.											.	.	.
Template Conservation															.	.	.
Template Sequence		M	T	A	I	R	L	A	R	G	Y	T	G	R	.	.	.	D	L	I	L	K	F	D	G	C	Y	H	G	S	H	D	A	V	L	V	A	A	G	G	V	P	T	S	A	G	V	P	E	A	V	A	R	L	T	L	V	T	P	Y	N	D	V	E	A	L	E	R	V	F	A	E	Y	G	D	R	I	A	G	V	I
Template Known Secondary structure															.	.	.								T					S	S	G	G	G	S								S	S	T	T							T	T						T	T													G	G	G
Template Predicted Secondary structure															.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		185	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		V	S	R	.	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N
Query Conservation					.
Alig confidence					.																																																								.	.	.
Template Conservation																																																													.	.	.
Template Sequence		V	E	P	V	I	A	N	A	G	V	I	P	P	R	R	E	F	L	A	A	L	Q	R	L	S	R	E	S	G	A	L	L	I	L	D	E	V	V	T	G	F	R	L	G	L	E	G	A	Q	G	Y	F	N	I	E	G	D	I	I	.	.	.	V	L	G	K	I	I	G	G	G	F	P	V	G	A	V	A	G	S
Template Known Secondary structure				S	S	B		S	S	S		B																		T								T	T	T	T	T	T	S	S	T	T							T				S			.	.	.				G	G	G	G	T	T	S	S
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	.	.	.	.	R	C	L	I	H	K	P	E	G	A	I
Query Conservation																																																																			.	.	.	.
Alig confidence																																	.	.																																	.	.	.	.
Template Conservation																																	.	.
Template Sequence		R	E	V	M	S	L	L	T	P	Q	G	K	V	F	N	A	G	T	F	N	A	H	P	I	T	M	A	A	G	L	A	.	.	T	L	K	A	L	E	E	E	P	V	Y	S	V	S	R	E	A	A	K	A	L	E	E	A	A	S	E	V	L	D	R	T	G	L	P	Y	T	I	N	R	V	E	S	M	M	Q	L
Template Known Secondary structure						T	T	B	T	T	T	S	S	B					T	T	T	T											.	.								S																						T	T	S	S									T	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
		340	.	.	.	.	.	.	.									.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure										.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.
Query Sequence		F	L	W	L	W	F	K	D	.	.	.	.	.	.	.	.	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R
Query Conservation										.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	G	V	E	E	V	S	N	A	A	Q	A	R	K	A	D	K	K	F	Y	V	K	L	H	E	E	M	L	R	R	G	V	F	I	A	P	S	N	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	F	T	G	L	P	H	Q	G	E	A	L	E	I	A	V	E	G	L	R	S	S	L	K	T
Template Known Secondary structure				T		S			S	S					T	T	S															T	T					S	S	T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.														.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
		412	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	G
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		431	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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