Job Description P09053 Confidence 99.94% Date Thu Jan 5 11:01:50 GMT 2012 Rank 159 Aligned Residues 290 % Identity 12% Template c2x3lA_ PDB info PDB header:lyase Chain: A: PDB Molecule:orn/lys/arg decarboxylase family protein; PDBTitle: crystal structure of the orn_lys_arg decarboxylase family2 protein sar0482 from methicillin-resistant staphylococcus3 aureus Resolution 2.00 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template Sequence		H	H	P	E	E	V	I	L	K	S	M	K	Q	V	E	K	H	S	.	.	.	.	.	.	.	.	D	Y	D	G	Y	F	L	V	N	G	T	T	S	G	I	L	S	V	I	Q	S	F	S	Q	K	K	G	D	I	L	M	A	R	.	.	.	.	.	.	N	V	H	K	S	V	L	H	A	L	D	I	S	Q	Q
Template Known Secondary structure		T	S		S	S											S		T	.	.	.	.	.	.	.	.	T							S	S												T	T	T	T	S	S	S						T	.	.	.	.	.	.	T													T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																																		.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70									.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.							.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.																.									.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.																.									.	.	.
Template Sequence		E	G	H	F	I	E	T	H	Q	S	P	L	T	N	H	.	.	.	.	.	.	.	.	.	Y	N	K	V	N	L	H	K	L	V	V	L	T	Y	P	.	N	Y	Y	G	E	T	F	N	.	.	.	V	E	E	V	I	K	S	L	H	Q	L	N	I	P	V	L	I	D	E	A	H	G	A	H	F	G	L	Q	G
Template Known Secondary structure												T	T	T	S	S	.	.	.	.	.	.	.	.	.														S	S	.		T	T	S					.	.	.											T	T								T	T		T	T	T	T	S	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																.									.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	.	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P
Query Conservation																									.
Alig confidence		.																							.																																											.	.	.	.	.
Template Conservation		.																																																																		.	.	.	.	.
Template Sequence		.	F	P	D	S	T	L	N	Y	Q	A	D	Y	V	V	Q	S	F	H	T	L	P	A	L	T	M	G	S	V	L	Y	I	H	K	N	A	P	Y	R	E	N	I	I	E	Y	L	S	Y	F	Q	T	S	S	P	S	Y	L	I	M	A	S	L	E	S	A	A	.	.	.	.	.	Q	F	Y	K	T	Y	D	S	T
Template Known Secondary structure		.	S				G	G	G	G	T		S										S	S		T	T								T	T		T	T												S		S	S														.	.	.	.	.
Template Predicted Secondary structure		.																																																																		.	.	.	.	.
Template SS confidence
			193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R
Query Conservation
Alig confidence																		.	.	.	.																			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.																			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	F	A	K	R	A	Q	L	I	E	C	L	E	N	K	.	.	.	.	G	F	E	M	L	Q	V	D	D	P	L	K	L	L	I	K	Y	E	.	.	G	F	T	G	H	D	I	Q	N	W	F	M	N	A	H	I	Y	L	E	L	A	D	D	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	L
Template Known Secondary structure																		.	.	.	.	T							S	S	T	T							T	.	.	T	S												T	T				S				S	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.																			.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.														.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	L	P	L	W	H	H	D	D	T	Y	L	F	D	S	L	L	R	K	I	E	D
Template Known Secondary structure									T	T														T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions