Job Description P09053 Confidence 99.97% Date Thu Jan 5 11:01:50 GMT 2012 Rank 112 Aligned Residues 345 % Identity 13% Template c2po3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:4-dehydrase; PDBTitle: crystal structure analysis of desi in the presence of its2 tdp-sugar product Resolution 2.10 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F
Query Conservation
Alig confidence									.	.																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation									.	.																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		L	L	V	G	R	P	N	.	.	R	I	D	R	A	R	L	Y	E	R	L	D	R	A	L	D	S	Q	W	L	.	.	.	.	.	.	S	N	G	G	P	L	V	R	E	F	E	E	R	V	A	G	L	A	.	.	.	.	.	.	.	.	G	V	R	H	A	V	A	T	C	N	A	T	A	G	L	Q	L	L	A
Template Known Secondary structure				T	T				.	.																		T			.	.	.	.	.	.	S	S	S																.	.	.	.	.	.	.	.	T	S	S						S
Template Predicted Secondary structure									.	.																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		2021	.	.	.	.	.	.			.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.							.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.									.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N
Query Conservation
Alig confidence					.											.	.	.	.	.	.																							.	.	.	.																									.	.	.
Template Conservation					.											.	.	.	.	.	.																							.	.	.	.																									.	.	.
Template Sequence		H	A	A	.	G	L	T	G	E	V	I	M	P	S	.	.	.	.	.	.	M	T	F	A	A	T	P	H	A	L	R	W	I	G	L	T	P	V	F	A	D	I	.	.	.	.	D	P	D	T	G	N	L	D	P	D	Q	V	A	A	A	V	T	P	R	T	S	A	V	V	.	.	.	G	V	H	L	W	G	R
Template Known Secondary structure					.	T			S						S	.	.	.	.	.	.	S	S		T									T	T								B	.	.	.	.		T	T	T	S	S	B		S	T	T							T	T						.	.	.				G	G	G
Template Predicted Secondary structure					.											.	.	.	.	.	.																							.	.	.	.																									.	.	.
Template SS confidence
		2085	.	.		.	.	2090	.	.	.	.	.	.	.							.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.	.	.	.	.					2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.				.	.	.	.	.	.	2150
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N
Query Conservation
Alig confidence					.	.	.																																								.	.
Template Conservation					.	.	.																																								.	.
Template Sequence		P	C	A	.	.	.	A	D	Q	L	R	K	V	A	D	E	H	G	L	R	L	Y	F	D	A	A	H	A	L	G	C	A	V	D	G	R	P	A	G	S	L	G	D	A	E	.	.	V	F	S	F	H	A	T	K	A	V	N	A	F	E	G	G	A	V	V	T	D	D	A	D	L	A	A	R	I	R	A	L	H
Template Known Secondary structure					.	.	.												T								T	T		T	T				T	T			T	T	S	S	S	S	S		.	.						T	T	S	S	S			S	S							S												T
Template Predicted Secondary structure					.	.	.																																								.	.
Template SS confidence
		2151	.	.				.	.	.	.	.	.	2160	.	.	.	.	.	.	.	.	.	2170	.	.	.	.	.	.	.	.	.	2180	.	.	.	.	.	.	.	.	.	2190	.	.			.	.	.	.	.	.	.	2200	.	.	.	.	.	.	.	.	.	2210	.	.	.	.	.	.	.	.	.	2220	.	.	.	.	.
											275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	F	G	F	D	L	P	G	G	S	P	A	G	G	T	N	A	K	M	S	E	A	A	A	A	M	G	L	T	S	L	D	A	F	P	E	V	I	D	R	N	R	R	N	H	A	A	Y	R	E	H	L	A	D	L	P	G	V	L	V	A	D	H	D	R	H	G	L	N	N	H	Q	Y	V	I	V	E	I	D	E
Template Known Secondary structure		B	T	T	T	T		T	T			T	T				B		B																																		T		S		T	T						G	G	G	G	S	B
Template Predicted Secondary structure
Template SS confidence
		2226	.	.	.	2230	.	.	.	.	.	.	.	.	.	2240	.	.	.	.	.	.	.	.	.	2250	.	.	.	.	.	.	.	.	.	2260	.	.	.	.	.	.	.	.	.	2270	.	.	.	.	.	.	.	.	.	2280	.	.	.	.	.	.	.	.	.	2290	.	.	.	.	.	.	.	.	.	2300	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.													.	.	.	.	.	.	390	.	.	.			.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.											.	.
Query Sequence		K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	C	M	R	M	N	Y	V	P	.	.	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.											.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		A	T	T	G	I	H	R	D	L	V	M	E	V	L	K	A	E	G	V	H	T	R	A	Y	F	S	P	G	C	H	E	L	E	P	Y	R	G	Q	P	H	A	P	L	P	H	T	E	R	L	A	A	R	V	L	S	L	P	T	G	T	A	I	G	D	D	D	I	R	R	V	A	D	L	L	R	L	C	A	T	R
Template Known Secondary structure					S	S												T	T				B		T	T		S		G	G	G	S	T	T	T	T	T	S													T	T							S	T	T																			S
Template Predicted Secondary structure
Template SS confidence
		2306	.	.	.	2310	.	.	.	.	.	.	.	.	.	2320	.	.	.	.	.	.	.	.	.	2330	.	.	.	.	.	.	.	.	.	2340	.	.	.	.	.	.	.	.	.	2350	.	.	.	.	.	.	.	.	.	2360	.	.	.	.	.	.	.	.	.	2370	.	.	.	.	.	.	.	.	.	2380	.	.	.	.	.
		412	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		2386	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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