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Job DescriptionP09053
Confidence99.94%DateThu Jan 5 11:01:50 GMT 2012
Rank150Aligned Residues339
% Identity16%Templatec2pb2B_
PDB info PDB header:transferaseChain: B: PDB Molecule:acetylornithine/succinyldiaminopimelate aminotransferase; PDBTitle: structure of biosynthetic n-acetylornithine aminotransferase from2 salmonella typhimurium: studies on substrate specificity and3 inhibitor binding
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  AIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFF
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Template Sequence  VTALGHCHP. . . . . . . . ALVEALKSQGETL. . . . . . . WHTSNVFTNEPALRLGRKLIDATF. . . . AERVLFMNSGTEANE
Template Known Secondary structure  T
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   53......60. ........70.... .....80.........90........ .100.........110...
 
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Query Sequence  YLFNLFAGRRADGRVKKV. . LFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQF. . . KYHVDFEHLHIGEETGMICVS
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Template Sequence  TAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVE
Template Known Secondary structure  T
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TT



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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
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Query Sequence  RPTNPTGN. VITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEK
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Template Sequence  PIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL. . TSAKALGGGFPVSAMLTTQE
Template Known Secondary structure  STTTTS

T

TTTTTTTTSSSST


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   194.....200.........210.........220.........230.........240.........250. ........260.........270.
 
   266...270.........280.........290.........300.........310.........320.........330.........340.....
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Query Sequence  IITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWF
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Template Sequence  I. . . . . . ASAFSTYGGNPLACAVAGAAFDIIN. TPEVLQGIHTKRQQFVQHLQAIDEQF. . . DIFSDIRGMGLLIGAELK
Template Known Secondary structure  ......TT




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   272 .......280.........290....... ..300.........310.........320... ......330.........340.
 
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Query Sequence  KDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRM. . NYVPEPEKIEAGVKILAEEIERAWA
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Template Sequence  PKYKGRARDFLYAGAEAGVMVLN. . . . . . . . . . . . . AGADVMRFAPSLVVEEADIHEGMQRFAQAVGKVVA
Template Known Secondary structure  GGGTT
TT
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TT


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   348.350.........360.........370 .........380.........390.........400.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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