Job Description P09053 Confidence 99.79% Date Thu Jan 5 11:01:50 GMT 2012 Rank 222 Aligned Residues 331 % Identity 17% Template c2eo5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:419aa long hypothetical aminotransferase; PDBTitle: crystal structure of 4-aminobutyrate aminotransferase from sulfolobus2 tokodaii strain7 Resolution 1.90 Å

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		32	.	.	.	.	.	.	.		40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.							.
Query SS confidence										.							.
Query Sequence		A	I	M	L	G	G	G	N	.	P	A	Q	I	P	E	.	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A
Query Conservation										.							.
Alig confidence										.							.																				.	.	.	.	.	.																											.
Template Conservation																																					.	.	.	.	.	.																											.
Template Sequence		Y	L	D	F	T	S	G	I	G	V	N	N	L	G	W	P	S	H	P	E	V	I	K	I	G	I	E	Q	M	Q	K	L	A	H	A	.	.	.	.	.	.	A	A	N	D	F	Y	N	I	P	Q	L	E	L	A	K	K	L	V	T	Y	S	P	G	N	F	Q	.	K	K	V	F	F	S	N	S	G	T	E	A
Template Known Secondary structure					S	S	G	G	G	G	T	T	T	T		B	S														T	T	S				.	.	.	.	.	.	S		S		S																S	S		S	S		.							S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.																											.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.							.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		I	E	A	S	I	K	V	V	K	N	T	G	R	K	Y	I	.	.	.	.	I	A	F	L	G	G	F	H	G	R	T	F	G	S	I	S	L	T	A	S	K	A	V	Q	R	S	I	V	G	P	F	M	P	G	V	I	H	V	P	Y	P	N	P	Y	R	N	P	W	H	I	N	G	Y	E	N	P	S	E	L	V
Template Known Secondary structure											T	T	S					.	.	.	.				T	T					S	S									S		G	G	G	G		S	S					T	T									S	S	S		T	T				T	T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
					169	170	.	.	.	.	.	.	.							.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.										.	.	.	.	.	.																				.																										.
Query SS confidence		.	.	.										.	.	.	.	.	.																				.																										.
Query Sequence		.	.	.	V	D	F	E	H	L	H	I	G	.	.	.	.	.	.	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	.	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	.	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W
Query Conservation		.	.	.										.	.	.	.	.	.																				.																										.
Alig confidence		.	.	.										.	.	.	.	.	.																				.																										.
Template Conservation
Template Sequence		N	R	V	I	E	F	I	E	D	Y	I	F	V	N	L	V	P	P	E	E	V	A	G	I	F	F	E	P	I	Q	G	E	G	G	Y	V	I	P	P	K	N	F	F	A	E	L	Q	K	L	A	K	K	Y	G	I	L	L	V	D	D	E	V	Q	M	G	L	G	R	T	G	K	L	F	A	I	E	N	F	N	T
Template Known Secondary structure											T					T			G	G	G								S	S	B	T	T	T	T	S	B				T	T													T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	.	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E
Query Conservation																			.
Alig confidence							.	.	.										.													.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Conservation							.	.	.																							.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Sequence		V	P	D	V	I	.	.	.	T	L	A	K	A	L	G	G	G	I	M	P	I	G	A	T	I	F	R	K	D	L	.	.	.	.	.	.	.	.	D	F	K	T	F	G	G	N	A	L	A	C	A	I	G	S	K	V	I	D	.	.	.	.	.	.	.	I	V	K	D	L	L	P	H	V	N	E	I	G	K	I
Template Known Secondary structure				S			.	.	.				G	G	G	G	T	T	T	S									G	G	G	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.																							.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.
Template SS confidence
		273	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.									300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.								320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	.	.	Y	V	P	E
Query Conservation																																																																												.	.
Alig confidence																	.	.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																	.	.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	E	E	L	Q	G	L	A	D	D	V	R	G	I	.	.	.	.	.	.	G	L	A	W	G	L	E	Y	N	E	.	K	K	V	R	D	R	I	I	G	E	S	F	K	R	G	L	L	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	R	S	A	I	R	V	I	P	P	L	V	I	S
Template Known Secondary structure							T	T	S	S	S						.	.	.	.	.	.	T	T							S		.														T	T						.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T								T	T
Template Predicted Secondary structure																	.	.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.							.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.														.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	E	A	K	Q	G	L	D	I	L	K	K	V	I	K	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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