Job Description P09053 Confidence 99.97% Date Thu Jan 5 11:01:50 GMT 2012 Rank 93 Aligned Residues 338 % Identity 16% Template c2eh6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase from aquifex2 aeolicus vf5 Resolution 1.90 Å

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		32	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	I	M	L	G	G	G	N	.	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F
Query Conservation										.
Alig confidence										.																							.	.	.	.	.	.	.																									.	.	.
Template Conservation																																	.	.	.	.	.	.	.																									.	.	.
Template Sequence		Y	L	D	F	V	S	G	I	G	V	N	S	L	G	H	A	Y	P	K	L	T	E	A	L	K	E	Q	V	E	K	L	.	.	.	.	.	.	.	L	H	V	S	N	L	Y	E	N	P	W	Q	E	E	L	A	H	K	L	V	K	H	F	W	.	.	.	T	E	G	K	V	F	F	A	N	S	G	T	E	S	V
Template Known Secondary structure					S	S					T		T	T		B	S																.	.	.	.	.	.	.	S				T	T	S															T	S	S	.	.	.	S								S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																.																																								.	.	.
Query SS confidence																.																																								.	.	.
Query Sequence		F	Y	L	F	N	L	F	A	G	R	R	A	D	G	.	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	.	.	.	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	E	E	T	G	M	I	C	V	S
Query Conservation																.																																								.	.	.
Alig confidence																.																																								.	.	.
Template Conservation
Template Sequence		E	A	A	I	K	L	A	R	K	Y	W	R	D	K	G	K	N	K	W	K	F	I	S	F	E	N	S	F	H	G	R	T	Y	G	S	L	S	A	T	G	Q	P	K	F	H	K	G	F	E	P	L	V	P	G	F	S	Y	A	K	L	N	D	I	D	S	V	Y	K	L	L	D	E	E	T	A	G	I	I	I	E
Template Known Secondary structure															T	T										B	T					S	S								B		G	G	G	T	T	T	T		S			S	S						T	T							T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		R	P	T	N	P	T	G	.	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C	G	I	I	I	A	N	E	K
Query Conservation									.
Alig confidence									.																																																			.	.
Template Conservation																																																												.	.
Template Sequence		V	I	Q	G	E	G	G	V	N	E	A	S	E	D	F	L	S	K	L	Q	E	I	C	K	E	K	D	V	L	L	I	I	D	E	V	Q	T	G	I	G	R	T	G	E	F	Y	A	Y	Q	H	F	N	L	K	P	D	V	I	.	.	A	L	A	K	G	L	G	G	G	V	P	I	G	A	I	L	A	R	E	E
Template Known Secondary structure		S			T	T	T	T	S																			T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	G	G	G	T				S			.	.				G	G	G	G	T	T	S
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G	A	I	F	L	W	L	W	F
Query Conservation
Alig confidence																															.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.																											.	.	.	.	.
Template Sequence		V	A	Q	S	F	T	P	G	S	H	G	S	T	F	G	G	N	P	L	A	C	R	A	G	T	V	V	V	D	.	.	.	.	.	.	.	E	V	E	K	L	L	P	H	V	R	E	V	G	N	Y	F	K	E	K	L	K	E	L	G	K	G	.	.	.	.	.	K	V	K	G	R	G	L	M	L	G	L	E	L
Template Known Secondary structure				T	T			T	T	S				S	S	T	T														.	.	.	.	.	.	.																							T	T	S	S	.	.	.	.	.						T	T
Template Predicted Secondary structure																															.	.	.	.	.	.	.																											.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.						.	.	.	.	.	.	.	320	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.			390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		K	D	L	P	I	T	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	.	.	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I
Query Conservation																																														.	.
Alig confidence		.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation		.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	E	R	E	C	K	D	Y	V	L	K	A	L	E	K	G	L	L	I	N	C	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	G	K	V	L	R	F	L	P	P	L	I	I	Q	K	E	H	I	D	R	A	I	S	V	L	R	E	I	L
Template Known Secondary structure		.	.	.	S	S												T	T						.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T								T	T
Template Predicted Secondary structure		.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.														.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions