Job Description P09053 Confidence 99.93% Date Thu Jan 5 11:01:50 GMT 2012 Rank 165 Aligned Residues 338 % Identity 18% Template c2e7uA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8 Resolution 1.90 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	M	L	G	G	G	N	P	A	Q	I	P	E	M	Q	D	Y	F	Q	T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation												.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																								.	.	.
Template Sequence		G	P	L	I	L	G	H	A	H	P	.	.	.	.	.	.	.	.	K	V	L	A	R	V	R	E	T	L	E	R	.	.	.	.	.	.	.	.	.	G	L	T	F	G	A	P	S	P	L	E	V	A	L	A	K	K	V	K	R	A	Y	P	.	.	.	F	V	D	L	V	R	F	V	N	S	G	T	E	A	T
Template Known Secondary structure		T	T		T	T		B	T			.	.	.	.	.	.	.	.												T	.	.	.	.	.	.	.	.	.		S			S	S																	T	.	.	.	T								S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.									.	.	.	.	.	.	.	.	80	.	.	.										.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.											.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.											.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.											.	.	.
Query Sequence		F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F	P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	.	.	.	.	.	.	.	.	.	.	H	V	D	F	E	H	L	H	I	G	.	.	.
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.											.	.	.
Alig confidence															.	.	.	.																																									.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation															.	.	.	.
Template Sequence		M	S	A	L	R	L	A	R	G	Y	T	G	R	.	.	.	.	P	Y	I	V	K	F	R	G	N	Y	H	G	H	A	D	G	L	L	V	E	A	G	S	G	A	L	T	L	G	V	P	S	S	A	G	V	P	E	E	Y	A	K	L	T	L	V	L	E	Y	N	D	P	E	G	L	R	E	V	L	K	R	R	G
Template Known Secondary structure															.	.	.	.							T	T							G	G	G	S					S	S	S			B				S	S	T	T							T	T						T	T													G
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q	H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	G	S	R	C
Query Conservation
Alig confidence																																																																			.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		E	E	I	A	A	I	I	F	E	P	V	V	G	N	A	G	V	L	V	P	T	E	D	F	L	K	A	L	H	E	A	K	A	Y	G	V	L	L	I	A	D	E	V	M	T	G	F	R	L	A	F	G	G	A	T	E	L	L	G	L	K	P	D	L	V	.	.	.	T	L	G	K	I	L	G	G	G	L	P	A
Template Known Secondary structure		G	G								S	S	B		T	T	S		B													G	G	G	G	T								T	T	T	T	T	T	S	S	T	T							T				S			.	.	.				G	G	G	G	T	T	S	S
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M	M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	K	P	E	G
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		A	A	Y	A	G	R	R	E	I	M	E	K	V	A	P	L	G	P	V	Y	Q	A	G	T	L	S	G	N	P	L	A	M	A	A	G	L	A	T	L	E	L	L	E	E	N	.	P	G	Y	Y	A	Y	L	E	D	L	G	A	R	L	E	A	G	L	K	E	V	L	K	E	K	G	L	P	H	T	V	N	R	V
Template Known Secondary structure												T	T	B	T	T	T	S	S	B					T	T		S																			.	T																								T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.													.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	F	L	W	L	W	F	K	D	L	P	I	T	.	.	.	.	.	.	.	.	.	.	.	.	T	K	Q	L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	S	M	I	T	V	F	F	T	E	G	P	V	V	T	F	Q	D	A	R	R	T	D	T	E	L	F	K	R	F	F	H	G	L	L	D	R	G	I	Y	W	P	P	S	N	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	F	L	S	V	A	H	R	E	E	D	V	E	K	T	L	E	A	L
Template Known Secondary structure		T	T						S	S	S	S				S					T	T	S														T	T	T					S	S	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400														.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		406	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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