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Job DescriptionP09053
Confidence99.97%DateThu Jan 5 11:01:50 GMT 2012
Rank101Aligned Residues375
% Identity13%Templatec2dkjB_
PDB info PDB header:transferaseChain: B: PDB Molecule:serine hydroxymethyltransferase; PDBTitle: crystal structure of t.th.hb8 serine hydroxymethyltransferase
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
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Query Sequence  ITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDI
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Template Sequence  LFELIALEEK. . RQREGLELIASENFVSKQVREAVGSVLTN. . KYAEGYPGARYYGGCEVIDRVESLAIERAKALFG. . A
Template Known Secondary structure  ..S

TT




TSGGGG..



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   11........20 .........30.........40......... 50.........60.........70.........80... .
 
   96...100.........110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  EPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLH
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Template Sequence  AWANVQPHSG. SQANMAVYMALMEPGDTLMGMDL. . . AAGGHLTHGSRVNFSGKLYKVVSY. . GVRPDTELIDLEEVRRL
Template Known Secondary structure  S


SS.

TT

G...GGT

GGGT
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TTT
S

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   85....90.... .....100.........110....... ..120.........130.........140. ........150........
 
   176...180.........190.........200.........210.........220.........230.........240.........250.....
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Query Sequence  IGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGS
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Template Sequence  ALEHRPKVIVAGASAY. PRFWD. . . FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAH. . VVTSTTHKTLR. GP
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S

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TTTTTSS


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   159160.........170.... ..... 180.........190.........200.........210........ .220......... 230.
 
   256...260.........270.........280.........290.........300.........310.........320.........330.....
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Query Sequence  RCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKP
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Template Sequence  RGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVA. . . . FFEALQPEFKEYSRLVVENAKRLAEELARRGYRIVTG
Template Known Secondary structure  S
S
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   232.......240.........250.........260.........270 .........280.........290.........300.......
 
   336. ..340.........350.........360.........370.........380.........390 .........400........
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Query Sequence  EG. AIFLWLWFKDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMN. . . . . . YVPEPEKIEAGVKILAEE
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Template Sequence  GTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPP. . . RVTSGIRIGTPAITTRGFTPEEMPLVAELIDRA
Template Known Secondary structure  S
SSS
GGGT

TTT


TT

S
T...TT
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   308.310.........320.........330.........340.........350. ........360.........370.........380....
 
   409410......
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Query Sequence  IERAWAES
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Template Sequence  LLEGPSEA
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   385....390..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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