Job Description P09053 Confidence 99.93% Date Thu Jan 5 11:01:50 GMT 2012 Rank 164 Aligned Residues 322 % Identity 14% Template c1i41J_ PDB info PDB header:lyase Chain: J: PDB Molecule:cystathionine gamma-synthase; PDBTitle: cystathionine gamma-synthase in complex with the inhibitor2 appa Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	L	T	D	M	L	E	S	G	K	A	T	D	A	L	C	N	Y	D	G	P	Q	G	K	T	E	L	L	T	L	L	A	G	M	L	R	E	K	L	G	W	D	I	E	P	Q	N	I	A	L	T	N	G	S	Q	S	A	F	F	Y	L	F	N	L	F	A	G	R	R	A	D	G	R	V	K	K	V	L	F
Query Conservation
Alig confidence																									.													.	.	.	.	.	.	.	.
Template Conservation																									.													.	.	.	.	.	.	.	.
Template Sequence		S	E	L	I	D	F	K	E	K	R	R	A	S	F	E	Y	G	R	Y	G	N	P	T	.	T	V	V	L	E	E	K	I	S	A	L	E	.	.	.	.	.	.	.	.	G	A	E	S	T	L	L	M	A	S	G	M	C	A	S	T	V	M	L	L	A	L	V	P	A	G	G	H	I	V	T	T	T	D	C	Y
Template Known Secondary structure									T	T	S	S					B	G	G	G					.													.	.	.	.	.	.	.	.	T		S						S	S													S		T	T							S	S
Template Predicted Secondary structure																									.													.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		P	L	A	P	E	Y	I	G	Y	A	D	A	G	L	E	E	D	L	F	V	S	A	R	P	N	I	E	L	L	P	E	G	Q	F	K	Y	H	V	D	F	E	H	L	H	I	G	.	E	E	T	G	M	I	C	V	S	R	P	T	N	P	T	G	N	V	I	T	D	E	E	L	L	K	L	D	A	L	A	N	Q
Query Conservation																																																.
Alig confidence			.	.																							.	.	.	.	.	.	.	.	.	.												.																					.	.	.
Template Conservation			.	.																							.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Sequence		R	.	.	K	T	R	I	F	I	E	T	I	L	P	K	M	G	I	T	A	T	V	I	D	P	.	.	.	.	.	.	.	.	.	.	A	D	V	G	A	L	E	L	A	L	N	Q	K	K	V	N	L	F	F	T	E	S	P	T	N	P	F	L	R	C	V	D	.	.	.	I	E	L	V	S	K	L	C	H	E
Template Known Secondary structure			.	.									T	G	G	G	G	T								S	.	.	.	.	.	.	.	.	.	.	S												S									S	S		T	T	T						.	.	.
Template Predicted Secondary structure			.	.																							.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		164			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.											.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		H	G	I	P	L	V	I	D	N	A	Y	G	V	P	F	P	G	I	I	F	S	E	A	R	P	L	W	N	P	N	I	V	L	C	M	S	L	S	K	L	G	L	P	.	.	G	S	R	C	G	I	I	I	A	N	E	K	I	I	T	A	I	T	N	M	N	G	I	I	S	L	A	P	G	G	I	G	P	A	M
Query Conservation																																													.	.
Alig confidence																											.	.	.	.	.	.													.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		K	G	A	L	V	C	I	D	G	T	F	A	T	P	L	N	Q	K	A	L	A	L	G	A	D	.	.	.	.	.	.	L	V	L	H	S	A	T	K	F	L	G	G	H	N	D	V	L	A	G	C	I	S	G	P	L	K	L	V	S	E	I	R	N	L	H	H	I	L	G	G	A	L	N	P	N	A	A	Y	L
Template Known Secondary structure		T	T								T	T	T							T	T	T	T	T		S	.	.	.	.	.	.						T	T	T	T	T	T		S	S	S																								T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.							.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.															.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	C	E	M	I	K	R	N	D	L	L	R	L	S	E	T	V	I	K	P	F	Y	Y	Q	R	V	Q	E	T	I	A	I	I	R	R	Y	L	P	E	N	R	C	L	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	P	E	G	A	I	F	L	W	L	W	F	K	D	L	P	I	T	T	K	Q
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.
Template Sequence		I	I	R	G	M	K	.	.	.	.	.	.	.	T	L	H	L	R	V	Q	Q	Q	N	S	T	A	L	R	M	A	E	I	L	E	A	H	P	K	V	R	H	V	Y	Y	P	G	L	Q	S	H	P	E	H	H	I	A	K	K	Q	M	T	G	F	G	G	A	V	S	F	E	V	D	G	D	L	L	T	T	A	K
Template Known Secondary structure							T	.	.	.	.	.	.	.	T																							S	S							T	T	S	T	T	S	T	T									S				S							S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.								.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.															370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	Q	R	L	K	A	R	G	V	L	M	V	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	N	F	F	P	G	L	D	K	P	W	P	H	T	H	Q	C	M	R	M	N	Y	V	P	E	P	E	K	I	E	A	G	V	K	I	L	A	E	E	I	E	R	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																																																							.	.
Template Sequence		F	V	D	A	L	K	I	P	Y	I	A	P	S	F	G	G	C	E	S	I	V	D	Q	P	A	I	M	S	Y	W	D	L	S	Q	S	D	R	A	K	Y	G	I	M	D	N	L	V	R	F	S	F	G	V	.	.	E	D	F	D	D	L	K	A	D	I	L	Q	A	L	D	S	I
Template Known Secondary structure							S	S	S			S	S				S	S	S												T	T	S							T	T	T			S	S								S	.	.	S														T	T
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions