Job Description P0AFA9 Confidence 99.90% Date Thu Jan 5 11:25:47 GMT 2012 Rank 7 Aligned Residues 188 % Identity 18% Template d3dhwa1 SCOP info MetI-like MetI-like MetI-like Resolution 3.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.								.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.																												.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.																												.	.	.	.	.
Query Sequence		L	M	A	A	T	R	V	S	L	G	S	V	M	A	C	L	L	L	V	L	T	L	G	L	V	I	G	G	S	A	G	L	I	G	G	R	V	.	.	.	.	.	.	.	D	Q	A	T	M	R	V	A	D	M	F	M	T	F	P	T	S	I	L	S	F	F	M	V	G	V	L	.	.	.	.	.	G	T	G	L
Query Conservation																																							.	.	.	.	.	.	.																												.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation
Template Sequence		L	V	R	G	V	W	E	T	L	A	M	T	F	V	S	G	F	F	G	F	V	I	G	L	P	V	G	V	L	L	Y	V	T	R	P	G	Q	I	I	A	N	A	K	L	Y	R	T	V	S	A	I	V	N	I	F	R	S	I	P	F	I	I	L	L	V	W	M	I	P	F	T	R	V	I	V	G	T	S	I	G
Template Known Secondary structure																							T	T	G	G	G	G	G	G	G	G	G	G	T	T		S	S	S			S	S															S																T	T			S	S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	V	I	I	A	I	A	L	S	H	W	A	W	Y	A	R	M	V	R	S	L	V	I	S	L	R	Q	R	E	F	V	L	A	S	R	L	S	G	A	G	H	V	R	V	F	V	D	H	L	A	G	A	V	I	P	S	L	L	V	L	A	T	L	D	I	G	H	M	M	L	H	V	A	G	M	S	F	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	A	A	I	V	P	L	T	V	G	A	A	P	F	I	A	R	M	V	E	N	A	L	L	E	I	P	T	G	L	I	E	A	S	R	A	M	G	A	T	P	M	Q	I	V	R	K	V	L	L	P	E	A	L	P	G	L	V	N	A	A	T	I	T	L	I	T	L	V	G	Y	S	A	M	G	G	A	V	G
Template Known Secondary structure																												S		T	T	T	T	T						T			T							T	T																												S	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	T	A	P	T	A	E	W	G	V	M	I	N	D	A	R	Q	Y	I	W	T	Q	P	L	Q	M	F	W	P	G	L	A	L	F	I	S	V	M	A	F	N	L	V	G	D
Query Conservation
Alig confidence		.	.	.	.	.	.															.
Template Conservation		.	.	.	.	.	.															.
Template Sequence		.	.	.	.	.	.	A	G	G	L	G	Q	I	G	Y	Q	Y	G	Y	I	.	G	Y	N	A	T	V	M	N	T	V	L	V	L	L	V	I	L	V	Y	L	I	Q	F	A	G	D
Template Known Secondary structure		.	.	.	.	.	.														S	.	S			T	T
Template Predicted Secondary structure		.	.	.	.	.	.															.
Template SS confidence
								169	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions