Return to main results Retrieve Phyre Job Id

Job DescriptionP60785
Confidence100.00%DateThu Jan 5 12:07:11 GMT 2012
Rank36Aligned Residues161
% Identity41%Templated2bv3a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNFIDTPG
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Template Sequence  LKRLRNIGIAAHIDAGKTTTTERILYYTGRIHK. . . . . . . . . . . . . . . . RGITITAAVTTCFWK. . . . . DHRINIIDAPG
Template Known Secondary structure  GGG
TTS
TSS

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ST.....T


S
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   910.........20.........30.........40. ........50...... ...60.......
 
   81........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  HVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDAT. . . .
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Template Sequence  HVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQL
Template Known Secondary structure  SSS
STT

TTTSS
TTT


TTSTT

TT



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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
  
Predicted Secondary structure  ................................................................................
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  PIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAI
Template Known Secondary structure  S
GGG

TTTTSSSSS




GGGTT
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   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   157..160.........170.........180..
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Query Sequence  . . . . . . . . . . DAVRCSAKTGVGVQDVLERLVRDIPP
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Template Sequence  RKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPS
Template Known Secondary structure  TTS

BTTTTBSS

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   247..250.........260.........270.........280..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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