 |
Job Description | P60785 | Confidence | 99.87% | Date | Thu Jan 5 12:07:11 GMT 2012 |
Rank | 48 | Aligned Residues | 96 |
% Identity | 19% | Template | d1n0ua5 |
SCOP info | Ferredoxin-like
| EF-G C-terminal domain-like
| EF-G/eEF-2 domains III and V
|
Resolution | 2.12 |
|
 |
  |   |
401 | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | P | I | A | E | C | H | M | L | L | P | Q | A | Y | L | G | N | V | I | T | L | C | V | E | K | R | G | V | Q | T | N | M | V | Y | H | G | N | Q | V | A | L | T | Y | E | I | P | M | A | E | V | V | L | D | F | F | D | R | L | K | S | T | S | R | G | Y | A | S | L | D | Y | N | F | K | R | F | Q | A | S | D | M |
Query Conservation |   |
|
|
|   |   |   |   |
|   |
|
|   |
|   |   |
|   |
|
|   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|
|
|   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   | . |   |   |   |
|   |
|   |
|
|   |   |
|   | . |   |
|
|   |   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|   |   |
|   |   | . | . | . |
Template Sequence |   |
E | P | V | F | L | V | E | I | Q | C | P | E | Q | A | V | G | G | I | Y | S | V | L | N | K | K | R | G | Q | V | V | S | E | E | Q | T | P | . |
L | F | T | V | K | A | Y | L | P | V | N | E | S | . |
F | G | F | T | G | E | L | R | Q | A | T | G | G | Q | A | F | P | Q | M | V | F | D | H | W | S | T | . |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  | G | G | G |
| . | T | T |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |  |  |  |  |  |  |  |  |
|  |  |  |  | . |  |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
726 | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | |
. | . | . | . | . | . | . | . | 770 | . | . | . | . | |
. | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | |
|
|
  |
  |   |
481 | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | V | D | V | L | I | N | G | E | R | V | D | A | L | A | L | I | T | H | R | D | N | S | Q | N | R | G | R | E | L | V | E | K | M | K | D |
Query Conservation |   |
  |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |
|
|   |
|
|   |
| . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
L | G | S | D | P | L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | T | S | K | A | G | E | I | V | L | A | A | R | K |
Template Known Secondary structure |   |
. | . | . | . | . | . |
|
| S |
| T | T |
| . | . | . | . | . | . | . | . | . | . | T | T | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
804 | . | . | . | . | . | 810 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 820 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|