Return to main results Retrieve Phyre Job Id

Job DescriptionP60785
Confidence98.67%DateThu Jan 5 12:07:11 GMT 2012
Rank278Aligned Residues94
% Identity20%Templated1kk1a1
SCOP infoReductase/isomerase/elongation factor common domain Translation proteins Elongation factors
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   183......190.........200.. .......210.........220.........230. ........240......
Predicted Secondary structure 








....










............




Query SS confidence 



















. . . .




























. . . . . . . . . . . .














Query Sequence  PEGDPEGPLQALIIDSWFDN. . . . YLGVVSLIRIKNGTLRKGDKVKVMSTGQT. . . . . . . . . . . . YNADRLGIFTPKQVD
Query Conservation 
      

   
 
   
 ....  
 
   

 

 

 

 
        ............  
  
 
       
Alig confidence 



















....




























............







...



Template Conservation 
 
    
    
   
 
       
 





 

 

 

 
 
 
                  




 ...    
Template Sequence  PKRDPNKPPKMLVLRSFDVNKPGKLVGGVLDGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQA. . . GGQF
Template Known Secondary structure 



TTS



S







S
TT
TT...TT
Template Predicted Secondary structure 































...

Template SS confidence 















































































   201........210.........220.........230.........240.........250.........260.........270... ....
 
   247..250.........260. ........270.........
Predicted Secondary structure 




...









Query SS confidence 














. . .

















Query Sequence  RTELKCGEVGWLVCA. . . IKDIHGAPVGDTLTLARN
Query Conservation       

  
 

  ...   
     



     
Alig confidence 














...

















Template Conservation 
  
  
  


 
 

  
   

  
 

  
  
Template Sequence  VEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGK
Template Known Secondary structure  S
SSS
SS
GGGTGGGTTTT

TT
Template Predicted Secondary structure 

















Template SS confidence 



































   282.......290.........300.........310.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions