Job Description P60785 Confidence 99.26% Date Thu Jan 5 12:07:11 GMT 2012 Rank 179 Aligned Residues 123 % Identity 15% Template c3t5dC_ PDB info PDB header:signaling protein Chain: C: PDB Molecule:septin-7; PDBTitle: crystal structure of septin 7 in complex with gdp Resolution 3.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.													.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		T	L	M	V	V	G	E	S	G	L	G	K	S	T	L	I	N	S	L	F	L	T	D	L	I	K	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	Q	V	E	Q	S	K	V	L	I	K	E	V	.	.	.	Q	L	L	L	T	I	V	D	T	P	G	F	G	D	A	V
Template Known Secondary structure									T	T	S	S									S	S	S					S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.													S			S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																					60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
				82	.	.	.	.	.	.	.	90	.	.	.	.																						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	V	D	F	S	Y	E	V	S	R	S	L	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A
Query Conservation		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	S	N	C	W	Q	P	V	I	D	Y	I	D	S	K	F	E	D	Y	L	N	A	E	S	R	V	N	R	R	Q	M	P	D	N	R	V	Q	C	C	L	Y	F	I	A	P	S	G	H	G	L	K	P	L	D	I	E	F	M	K	R	L	H	E	K	V	N	I	I	P	L	I	A	K	A	D	T	L	T	P
Template Known Secondary structure				T	T	T	T																				S	S				S															S			S	S													T	T	T	S							S	S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
			139	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	D	P	E	R	V	A	E	E	I	E	D	I	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		E	E	C	Q	Q	F	K	K	Q	I	M	K	E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions