Job Description P60785 Confidence 98.45% Date Thu Jan 5 12:07:11 GMT 2012 Rank 289 Aligned Residues 125 % Identity 19% Template c3snhA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of nucleotide-free human dynamin1 Resolution 3.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.																									40	.	.	.	.	.	.	.	.	.										50	.	.
Predicted Secondary structure																											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query SS confidence																											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query Sequence		F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	.	S	D	R	E	M	E	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	D	S	M	D	L	E	R	E	.	.	.	.	.	.	.	.	.	R	G	I
Query Conservation																											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.					.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	.	.	.	V	G	R	D	F	L	P	R	G	S	G	T	R	R	P	L	V	L	Q	L	V	N	A	T	T	E	Y	A	E	F	L	H	C	K	G	K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	K	G	I
Template Known Secondary structure								T	T											.	.	.		T	S			S		S	S					S										S	S						T	T	T		S			B																	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.																							.										.
Query SS confidence																														.	.	.	.	.	.																							.										.
Query Sequence		T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	.	.	.	.	.	.	H	V	D	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	.	D	A	G	Q	G	V	E	A	Q	.	T	L	A	N	C	Y	T	A	M	E	M	D	L
Query Conservation																														.	.	.	.	.	.																							.										.
Alig confidence																		.	.	.	.									.	.	.	.	.	.																							.										.
Template Conservation																		.	.	.	.
Template Sequence		S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	.	.	.	.	L	T	L	V	D	L	P	G	M	T	K	P	D	I	E	F	Q	I	R	D	M	L	M	Q	F	V	T	K	E	N	C	L	I	L	A	V	S	P	A	N	S	D	L	A	N	S	D	A	L	K	V	A	K	E	V	D	P	Q	G	Q
Template Known Secondary structure			S										S	S	S		S	.	.	.	.																												S	T	T									T	T	S		S	T	T												S	S	S	S
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	V	P	V	L	N	K	I	D	L	P	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	I	G	V	I	T	K	L	D	L	M	D	E
Template Known Secondary structure		S								S	T	T	S		T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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