Job Description P60785 Confidence 100.00% Date Thu Jan 5 12:07:11 GMT 2012 Rank 19 Aligned Residues 268 % Identity 17% Template c3p27A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: crystal structure of a translational gtpase (gdp form) Resolution 2.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S
Query Conservation
Alig confidence																														.	.	.	.																												.	.	.	.	.																.
Template Conservation																														.	.	.	.																												.	.	.	.	.																.
Template Sequence		S	F	V	V	L	G	H	V	D	A	G	K	S	T	L	X	G	R	L	L	Y	D	L	N	I	V	N	Q	.	.	.	.	S	Q	L	R	K	L	Q	R	W	I	X	D	Q	T	V	T	V	S	I	C	T	S	H	F	S	T	H	.	.	.	.	.	R	A	N	F	T	I	V	D	A	P	G	V	P	N	A	.
Template Known Secondary structure									T	T	S	S												T	T	S	S		T	.	.	.	.	T																										S	.	.	.	.	.	S															.
Template Predicted Secondary structure																														.	.	.	.																												.	.	.	.	.																.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.						.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.						.	.	.	.
Predicted Secondary structure																								.																			.															.	.	.													.	.	.	.	.
Query SS confidence																								.																			.															.	.	.													.	.	.	.	.
Query Sequence		Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	.	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	L	E	.	V	V	P	V	L	N	K	I	D	L	P	A	A	D	.	.	.	P	E	R	V	A	E	E	I	E	D	I	V	.	.	.	.	.	G	I	D	A
Query Conservation																								.																			.															.	.	.													.	.	.	.	.
Alig confidence		.	.	.																				.																			.															.	.	.													.	.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	I	X	G	I	S	Q	A	D	X	A	I	L	C	V	D	C	S	T	F	D	L	D	G	Q	T	K	E	H	X	L	L	A	S	S	L	G	I	H	N	L	I	I	A	X	N	K	X	D	N	V	D	W	S	Q	Q	R	F	E	E	I	K	S	K	L	L	P	Y	L	V	D	I	G	F	F	E	D	N
Template Known Secondary structure		.	.	.								S																											T	T											G	G	G	G	T	T																				T			G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170																			.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		T	D	A	V	R	C	S	A	K	T	G	V	G	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	L	E	R	L	V	R	D	I	P	P	P	.	.	E	G	D	P	E	G	P	L	Q	A	L	I	I	D	S	W	F	D	N	Y	L	G	V	V	S	L	I	R	I	K	N	G
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.																	.	.
Template Conservation																																																																		.	.
Template Sequence		I	N	W	V	P	I	S	G	F	S	G	E	G	V	Y	K	I	E	Y	T	D	E	V	R	Q	W	Y	N	G	P	N	L	X	S	T	L	E	N	A	A	F	K	I	S	K	E	N	E	G	I	N	K	D	D	P	F	L	F	S	V	L	E	I	I	.	.	P	S	K	L	A	L	V	S	G	K	L	E	S	G
Template Known Secondary structure									T	T	T		B	T	T	S	S	B								T	T			S																		T	T	S			S	S	S											.	.														S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.			410	.	.	.	.	.	.	.	.	.	420	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	K	G	D	K	V	K	V	M	S	T	G	Q	T	Y	N	A	D	R	L	G	I	F	T	P	K	Q	V	D	R	T	E	L	K	C	G	E	V	G	W	L	V	C	A	I	K	D	I	H	G	A	P	V	G	D	T	L	T	L	A	R	N	P	A	E	K	A	L	P	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	Q	P	G	E	S	L	T	I	Y	P	S	E	Q	S	C	I	V	D	K	I	Q	V	G	S	Q	Q	H	E	E	T	D	V	A	I	K	G	D	F	V	T	L	K	L	R	K	A	Y	P	E	D	I	Q	N	G	D	L	A	A	S	V	D	Y	S	S	I	H	S	A	Q	C	F
Template Known Secondary structure					T	T							T	T	T											T	T	T						S				T	T									S			G	G	G			T	T						T	T								S
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions