Return to main results Retrieve Phyre Job Id

Job DescriptionP60785
Confidence99.30%DateThu Jan 5 12:07:11 GMT 2012
Rank163Aligned Residues143
% Identity14%Templatec3p1jB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of human gtpase imap family member 2 in the2 nucleotide-free state
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 






























.....
Query SS confidence 










































































. . . . .
Query Sequence  NFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNFIDTPG. . . . .
Query Conservation 








 




 
 

  

 
          
    







                  







.....
Alig confidence 

































.................................







.....
Template Conservation   
 


   







 
 
  
          .................................    

 
     
Template Sequence  RIILVGKTGTGKSAAGNSILRKTLTKTCSKSQGE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IVIIDTPDMFSWK
Template Known Secondary structure  S
T




S


.................................

GGGGSS
Template Predicted Secondary structure 











.................................






Template SS confidence 















































































   24.....30.........40.........50....... ..60.........70
 
   81........90.........100.........110.........120.... .....130......... 140........
Predicted Secondary structure  ......










....








..
Query SS confidence  . . . . . .











































. . . .














. .








Query Sequence  . . . . . . HVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDL. . . . EVVPVLNKIDLPAAD. . PERVAEEIE
Query Conservation  ......
 

  

   
   








  

  

      
    
....
 







   

.. 
 
  

 
Alig confidence  ......











































....














..








Template Conservation                                                          


  
 
              
 
Template Sequence  DHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGHTIVLFTHNGGSLMDYMHDSDNKALS
Template Known Secondary structure 


TT

STT



GGGGGG




Template Predicted Secondary structure 



























Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   149150.........160.........170.........180.
Predicted Secondary structure 











Query SS confidence 
































Query Sequence  DIVGIDATDAVRCSAKTGVGVQDVLERLVRDIP
Query Conservation     
     

  


 
 

  


 

  

Alig confidence 
































Template Conservation               

     
 

   
     
Template Sequence  KLVAACGGRICAFNNNQDDQVKELMDCIEDLLM
Template Known Secondary structure  TTT



Template Predicted Secondary structure 








Template SS confidence 
































   170.........180.........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions