Job Description P60785 Confidence 99.43% Date Thu Jan 5 12:07:11 GMT 2012 Rank 124 Aligned Residues 150 % Identity 16% Template c3lxwA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 1; PDBTitle: crystal structure of human gtpase imap family member 1 Resolution 2.21 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		R	N	F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	.
Query Conservation																																																																																	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.															.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Sequence		R	R	L	I	L	V	G	R	T	G	A	G	K	S	A	T	G	N	S	I	L	G	Q	R	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	A	C	T	T	G	S	R	R	W	D	.	.	.	.	.	K	C	H	V	E	V	V	D	T	P	D	I	F	S	S
Template Known Secondary structure								S	S	T	T	S	S										T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S									T	.	.	.	.	.	T										S		S	S	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																							.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
													84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.																						.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.																						.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	F	S	Y	E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	.	.	.	.	L	E	V	V	P	V	L	N	K	I	D	L	P	A	A	D	P	E	R	V	A	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		Q	V	S	K	T	D	P	G	C	E	E	R	G	H	C	Y	L	L	S	A	P	G	P	H	A	L	L	L	V	T	Q	L	G	R	F	T	A	Q	D	Q	Q	A	V	R	Q	V	R	D	M	F	G	E	D	V	L	K	W	M	V	I	V	F	T	R	K	E	D	L	A	G	G	S	L	H	D	Y	V	S	N	T
Template Known Secondary structure		T					S	T	T	S											T	T			S								T	T	B																		G	G	G	G	G	G								G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
				145	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure		.	.																.	.	.	.	.
Query SS confidence		.	.																.	.	.	.	.
Query Sequence		.	.	E	E	I	E	D	I	V	G	I	D	A	T	D	A	V	.	.	.	.	.	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I	P
Query Conservation		.	.																.	.	.	.	.
Alig confidence		.	.																.	.	.	.	.
Template Conservation
Template Sequence		E	N	R	A	L	R	E	L	V	A	E	C	G	G	R	V	C	A	F	D	N	R	A	T	G	R	E	Q	E	A	Q	V	E	Q	L	L	G	M	V	E	G	L	V	L
Template Known Secondary structure													T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions