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Job DescriptionP60785
Confidence99.74%DateThu Jan 5 12:07:11 GMT 2012
Rank76Aligned Residues150
% Identity20%Templatec3lvrE_
PDB info PDB header:protein transportChain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium
Resolution3.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  RNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDF
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Template Sequence  MRILMLGLDAAGKTTILYKLKLGQSVTTIP. . . . . . . . . . . . . . . . . . TVGFNVETVTYK. . . . . NVKFNVWDVGGQDKI
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Query Sequence  SYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAM. . . . . EMDLEVVPVLNKIDLPAADPERVAEEIEDIVGI. . . . . D
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Template Sequence  RPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDA. . . MKPHEIQEKLGLTRIRDR
Template Known Secondary structure  STTGGGGTTT

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   71........80.........90.........100.........110.........120......... 130.........140.......
 
   155....160.........170.........180
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Query Sequence  ATDAVRCSAKTGVGVQDVLERLVRDI
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Template Sequence  NWYVQPSCATSGDGLYEGLTWLTSNY
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   148.150.........160.........170...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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