Job Description P60785 Confidence 99.25% Date Thu Jan 5 12:07:11 GMT 2012 Rank 180 Aligned Residues 156 % Identity 13% Template c3l82B_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: x-ray crystal structure of trf1 and fbx4 complex Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	I	I	A	H	I	D	H	G	K	S	T	L	S	D	R	I	I	Q	I	C	G	G	L	S	D	R	E	M	E	A	Q	V	L	D	S	M	D	L	E	R	E	R	G	I	T	I	K	A	Q	S	V	T	L	D	Y	K	A	S	D	G	E	T	Y	Q	L	N	F	I	D	T	P	G	H	V	D	F	S	Y
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.
Template Sequence		F	A	X	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	X	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	D	G	I	G	S	G	V	N	F	.	.	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	P	Q	I	.	.
Template Known Secondary structure							G	G	G	T	S	S	S	S								T			S	S							G	G	G	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S							.	.		S	S	S	S									S						.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.												.	.																				.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.													.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.		.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																							.	.																	.	.	.	.	.	.									.								.
Query SS confidence																							.	.																	.	.	.	.	.	.									.								.
Query Sequence		E	V	S	R	S	L	A	A	C	E	G	A	L	L	V	V	D	A	G	Q	G	.	.	V	E	A	Q	T	L	A	N	C	Y	T	A	M	E	M	D	.	.	.	.	.	.	L	E	V	V	P	V	L	N	.	K	I	D	L	P	A	A	.	D	P	E	R	V	A	E	E	I	E	D	I	V	G	I	D	A	T
Query Conservation																							.	.																	.	.	.	.	.	.									.								.
Alig confidence		.	.																				.	.																	.	.	.	.	.	.									.								.
Template Conservation		.	.
Template Sequence		.	.	Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	X	A	X	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	X	P	C	F	Y	L	A	H	E	L	H	L	N	L	L	N	H	P	W
Template Known Secondary structure		.	.								S									B	T	T																S		T	T	S	S		S		S									S	S	T	T	S		B										T	T	G	G	G	G		S
Template Predicted Secondary structure		.	.
Template SS confidence
				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	R	C	S	A	K	T	G	V	G	V	Q	D	V	L	E	R	L	V	R	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V
Template Known Secondary structure								T	T	T		T	T									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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